Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400081907 | Potato | cytosol | 82.74 | 87.28 |
| KRH09146 | Soybean | cytosol, nucleus | 86.85 | 87.09 |
| Solyc01g006510.2.1 | Tomato | cytosol, extracellular, nucleus, plastid | 84.66 | 87.04 |
| CDY00508 | Canola | cytosol | 81.64 | 86.13 |
| Bra028288.1-P | Field mustard | cytosol | 81.1 | 85.55 |
| CDY58156 | Canola | cytosol | 84.93 | 85.16 |
| AT5G51970.1 | Thale cress | cytosol | 84.11 | 84.34 |
| GSMUA_Achr4P19640_001 | Banana | cytosol | 83.56 | 83.79 |
| TraesCS7D01G269800.1 | Wheat | cytosol | 78.63 | 78.63 |
| TraesCS7A01G269300.1 | Wheat | cytosol | 78.63 | 78.63 |
| TraesCS7B01G167500.1 | Wheat | cytosol | 78.63 | 78.63 |
| GSMUA_Achr4P19630_001 | Banana | cytosol | 32.6 | 77.27 |
| Os08t0545200-02 | Rice | cytosol, plasma membrane, plastid | 77.53 | 76.69 |
| EES15252 | Sorghum | cytosol | 77.81 | 76.34 |
| Zm00001d031727_P004 | Maize | cytosol, extracellular, plastid | 76.44 | 76.23 |
| KRH38627 | Soybean | cytosol | 87.12 | 68.98 |
| HORVU7Hr1G056770.2 | Barley | cytosol | 77.81 | 68.77 |
| VIT_16s0100g00290.t01 | Wine grape | cytosol, endoplasmic reticulum, plasma membrane | 78.08 | 36.97 |
| VIT_07s0005g04610.t01 | Wine grape | cytosol | 9.32 | 28.1 |
| VIT_18s0001g15410.t01 | Wine grape | cytosol | 25.75 | 24.74 |
| VIT_07s0005g04600.t01 | Wine grape | cytosol | 15.89 | 24.58 |
| VIT_07s0031g03150.t01 | Wine grape | mitochondrion | 27.67 | 23.99 |
| VIT_04s0044g01110.t01 | Wine grape | cytosol | 24.93 | 23.95 |
| VIT_04s0044g01130.t01 | Wine grape | cytosol | 24.66 | 23.68 |
| VIT_18s0001g00410.t01 | Wine grape | cytosol | 25.48 | 23.54 |
| VIT_02s0025g02730.t01 | Wine grape | cytosol | 24.93 | 23.1 |
| VIT_16s0039g01500.t01 | Wine grape | cytosol | 11.23 | 23.03 |
| VIT_18s0001g15450.t01 | Wine grape | mitochondrion | 26.3 | 22.48 |
| VIT_18s0001g00380.t01 | Wine grape | cytosol | 23.56 | 22.45 |
| VIT_16s0039g00320.t01 | Wine grape | cytosol | 22.74 | 21.9 |
| VIT_06s0004g04330.t01 | Wine grape | cytosol | 23.01 | 21.21 |
| VIT_18s0001g06360.t01 | Wine grape | cytosol | 21.92 | 20.67 |
| VIT_06s0004g04320.t01 | Wine grape | mitochondrion, plastid | 20.82 | 20.27 |
| VIT_06s0004g04310.t01 | Wine grape | plastid | 19.73 | 19.0 |
| VIT_04s0044g01120.t01 | Wine grape | cytosol | 25.21 | 15.59 |
Protein Annotations
| EntrezGene:100265888 | wikigene:100265888 | Gene3D:3.40.50.720 | MapMan:3.5.2 | Gene3D:3.90.180.10 | InterPro:ADH_C |
| InterPro:ADH_N | InterPro:ADH_Zn_CS | EMBL:AM427660 | ProteinID:CAN73444 | ProteinID:CAN73444.1 | ProteinID:CBI31856 |
| ProteinID:CBI31856.3 | UniProt:D7TMY3 | EMBL:FN596000 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003939 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 | GO:GO:0009506 | GO:GO:0016491 | GO:GO:0046872 |
| GO:GO:0055114 | InterPro:GroES-like_sf | EntrezGene:LOC100265888 | wikigene:LOC100265888 | InterPro:NAD(P)-bd_dom_sf | PFAM:PF00107 |
| PFAM:PF08240 | InterPro:PKS_ER | ScanProsite:PS00059 | PANTHER:PTHR43161 | PANTHER:PTHR43161:SF8 | SMART:SM00829 |
| SUPFAM:SSF50129 | SUPFAM:SSF51735 | TIGR:TC58983 | UniParc:UPI00015CE04D | ArrayExpress:VIT_16s0100g00300 | EnsemblPlantsGene:VIT_16s0100g00300 |
| EnsemblPlants:VIT_16s0100g00300.t01 | unigene:Vvi.7948 | RefSeq:XP_002269895 | RefSeq:XP_002269895.1 | SEG:seg | : |
Description
No Description!
Coordinates
chr16:+:15675466..15679078
Molecular Weight (calculated)
39289.0 Da
IEP (calculated)
6.415
GRAVY (calculated)
0.106
Length
365 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKGGMSQGG DGRGEGEENM AAWLLGVNNL KIQPFILPPL GPHDVRVRMK AVGICGSDVH YLKKLRCADF IVKEPMVIGH ECAGIIDEVG PQVKSLVPGD
101: RVALEPGISC WRCQLCKEGR YNLCPEMKFF ATPPVHGSLA NQVVHPADLC FKLPDNVSLE EGAMCEPLSV GVHACRRADI GPESNVLVMG AGPIGLVTML
201: AARAFGAPRI VIVDVDDYRL SVAKDLGADE IVKVSTNIQD VAEEVVQIHK AMGARVDVSF DCAGFDKTMS TALSATSTGG KVCLVGMGHN EMTVPLTPAA
301: AREVDVVGVF RYKNTWPICI EFLRSVKIDV KPLITHRFGF SQREVEEAFE TSARGGTAIK VMFNL
101: RVALEPGISC WRCQLCKEGR YNLCPEMKFF ATPPVHGSLA NQVVHPADLC FKLPDNVSLE EGAMCEPLSV GVHACRRADI GPESNVLVMG AGPIGLVTML
201: AARAFGAPRI VIVDVDDYRL SVAKDLGADE IVKVSTNIQD VAEEVVQIHK AMGARVDVSF DCAGFDKTMS TALSATSTGG KVCLVGMGHN EMTVPLTPAA
301: AREVDVVGVF RYKNTWPICI EFLRSVKIDV KPLITHRFGF SQREVEEAFE TSARGGTAIK VMFNL
001: MGKGGMSQGE GSKVEEENMA AWLVGINTLK IQPFLLPSVG PHDVRVRMKA VGICGSDVHY LKTMRCADFV VKEPMVIGHE CAGIIEEVGE EVKHLVVGDR
101: VALEPGISCW RCNLCREGRY NLCPEMKFFA TPPVHGSLAN QVVHPADLCF KLPENVSLEE GAMCEPLSVG VHACRRAEVG PETNVLVMGA GPIGLVTMLA
201: ARAFSVPRIV IVDVDENRLA VAKQLGADEI VQVTTNLEDV GSEVEQIQKA MGSNIDVTFD CAGFNKTMST ALAATRCGGK VCLVGMGHGI MTVPLTPAAA
301: REVDVVGVFR YKNTWPLCLE FLTSGKIDVK PLITHRFGFS QKEVEDAFET SARGSNAIKV MFNL
101: VALEPGISCW RCNLCREGRY NLCPEMKFFA TPPVHGSLAN QVVHPADLCF KLPENVSLEE GAMCEPLSVG VHACRRAEVG PETNVLVMGA GPIGLVTMLA
201: ARAFSVPRIV IVDVDENRLA VAKQLGADEI VQVTTNLEDV GSEVEQIQKA MGSNIDVTFD CAGFNKTMST ALAATRCGGK VCLVGMGHGI MTVPLTPAAA
301: REVDVVGVFR YKNTWPLCLE FLTSGKIDVK PLITHRFGFS QKEVEDAFET SARGSNAIKV MFNL
Arabidopsis Description
SDHSorbitol dehydrogenase [Source:UniProtKB/Swiss-Prot;Acc:Q9FJ95]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.