Factsheet for VIT_18s0001g15410.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_04s0044g01130.t01	Wine grape	cytosol	88.95	88.95
VIT_04s0044g01110.t01	Wine grape	cytosol	88.68	88.68
PGSC0003DMT400079071	Potato	cytosol	86.32	86.32
Zm00001d033931_P002	Maize	cytosol, extracellular, plasma membrane	84.74	84.96
Os11t0210300-01	Rice	plasma membrane	84.47	84.7
GSMUA_Achr6P18590_001	Banana	cytosol	84.21	84.21
TraesCS4D01G103000.1	Wheat	golgi	83.95	84.17
TraesCS4B01G106300.1	Wheat	cytosol, golgi	83.95	84.17
TraesCS4A01G202100.2	Wheat	cytosol	83.95	84.17
KXG37606	Sorghum	cytosol	83.68	83.91
TraesCS4B01G106500.1	Wheat	cytosol	83.68	83.91
TraesCS1B01G389200.1	Wheat	cytosol	83.68	83.91
TraesCS1D01G376300.1	Wheat	cytosol, golgi	83.68	83.91
TraesCS4D01G103300.1	Wheat	cytosol	76.58	83.86
TraesCS4A01G202300.1	Wheat	cytosol	83.42	83.64
TraesCS4D01G103100.1	Wheat	cytosol	83.16	83.38
TraesCS4A01G202200.1	Wheat	cytosol	83.16	83.38
Zm00001d049059_P001	Maize	cytosol, extracellular	82.89	83.11
EES08380	Sorghum	cytosol	82.89	83.11
TraesCS4B01G106400.1	Wheat	cytosol	82.11	82.98
KXG28254	Sorghum	cytosol	58.42	82.84
TraesCS1A01G370200.1	Wheat	cytosol	82.11	82.54
Solyc06g059740.2.1	Tomato	plastid	82.89	82.03
Os11t0210500-01	Rice	cytosol, plastid	81.58	81.79
TraesCS5D01G196300.2	Wheat	cytosol	81.58	81.79
TraesCS5A01G193900.1	Wheat	cytosol	78.95	81.52
TraesCS1A01G370100.1	Wheat	cytosol	81.32	81.32
Os11t0210600-01	Rice	cytosol	63.16	80.81
TraesCS5B01G189200.1	Wheat	cytosol	80.53	80.74
VIT_18s0001g15450.t01	Wine grape	mitochondrion	83.95	74.71
HORVU5Hr1G057090.5	Barley	cytosol	65.79	65.79
VIT_07s0005g04610.t01	Wine grape	cytosol	20.0	62.81
VIT_07s0005g04600.t01	Wine grape	cytosol	36.32	58.47
VIT_04s0044g01120.t01	Wine grape	cytosol	88.95	57.29
VIT_16s0039g00320.t01	Wine grape	cytosol	53.95	54.09
VIT_18s0001g06360.t01	Wine grape	cytosol	53.42	52.45
VIT_18s0001g00380.t01	Wine grape	cytosol	51.05	50.65
VIT_02s0025g02730.t01	Wine grape	cytosol	52.11	50.25
VIT_18s0001g00410.t01	Wine grape	cytosol	49.47	47.59
VIT_16s0039g01500.t01	Wine grape	cytosol	19.74	42.13
VIT_06s0004g04330.t01	Wine grape	cytosol	42.89	41.16
VIT_06s0004g04320.t01	Wine grape	mitochondrion, plastid	39.47	40.0
VIT_06s0004g04310.t01	Wine grape	plastid	38.42	38.52
CDX73268	Canola	cytosol	3.42	28.89
VIT_07s0031g03150.t01	Wine grape	mitochondrion	29.21	26.37
VIT_16s0100g00300.t01	Wine grape	cytosol	24.74	25.75
VIT_16s0100g00290.t01	Wine grape	cytosol, endoplasmic reticulum, plasma membrane	23.95	11.8

Protein Annotations

EntrezGene:100232853	wikigene:100232853	MapMan:3.11.1.2	Gene3D:3.40.50.720	Gene3D:3.90.180.10	ProteinID:AAB65840
ProteinID:AAB65840.1	ProteinID:AAG01381	ProteinID:AAG01381.1	EntrezGene:ADH1	wikigene:ADH1	InterPro:ADH_C
InterPro:ADH_N	InterPro:ADH_Zn_CS	EMBL:AF194173	EMBL:AM464739	ProteinID:CAN68099	ProteinID:CAN68099.1
ProteinID:CBI19961	ProteinID:CBI19961.3	UniProt:E0CQN2	EMBL:FN595227	GO:GO:0003674	GO:GO:0003824
GO:GO:0004022	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0016491
GO:GO:0046872	GO:GO:0055114	InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF08240
ScanProsite:PS00059	PANTHER:PTHR43880	PANTHER:PTHR43880:SF9	SUPFAM:SSF50129	SUPFAM:SSF51735	TIGR:TC63091
EMBL:U36586	UniParc:UPI00015C7F58	ArrayExpress:VIT_18s0001g15410	EnsemblPlantsGene:VIT_18s0001g15410	EnsemblPlants:VIT_18s0001g15410.t01	unigene:Vvi.80
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr18:-:13539135..13541625

Molecular Weight (calculated)

41086.7 Da

IEP (calculated)

6.370

GRAVY (calculated)

0.017

Length

380 amino acids

Sequence
(BLAST)

001: MSGTAGQVIC CKAAVAWEAG KPLVIEEVEV APPQAMEVRL KILYTSLCHT DVYFWEAKGQ TPLFPRIFGH EAGGIVESVG EGVTDLKPGD HVLPIFTGEC
101: KDCAHCKSEE SNLCDLLRIN TDRGVMIHDG KSRFTIKGKP VYHFLGTSTF SEYTVVHVGC VAKINPLAPL DKVCVLSCGI STGLGATLNV AKPTKGSTVA
201: VFGLGAVGLA AAEGARIAGA SRIIGVDLNP KRYEDAKKFG VTDFVNPKDH EKSVQEVIVE MTGGGVDRSL ECTGNVNAMI SAFECVHDGW GVAVIVGVPN
301: KDDVFKTHPI NLLNERTLKG TFFGNYKPRS DIPAVVEKYM NKELEVEKFI THSVPFSEIN KAFEYMLNGE GLRCIIHMEP

Best Arabidopsis Sequence Match ( AT1G77120.1 )
(BLAST)

001: MSTTGQIIRC KAAVAWEAGK PLVIEEVEVA PPQKHEVRIK ILFTSLCHTD VYFWEAKGQT PLFPRIFGHE AGGIVESVGE GVTDLQPGDH VLPIFTGECG
101: ECRHCHSEES NMCDLLRINT ERGGMIHDGE SRFSINGKPI YHFLGTSTFS EYTVVHSGQV AKINPDAPLD KVCIVSCGLS TGLGATLNVA KPKKGQSVAI
201: FGLGAVGLGA AEGARIAGAS RIIGVDFNSK RFDQAKEFGV TECVNPKDHD KPIQQVIAEM TDGGVDRSVE CTGSVQAMIQ AFECVHDGWG VAVLVGVPSK
301: DDAFKTHPMN FLNERTLKGT FFGNYKPKTD IPGVVEKYMN KELELEKFIT HTVPFSEINK AFDYMLKGES IRCIITMGA

Arabidopsis Description

ADH1Alcohol dehydrogenase class-P [Source:UniProtKB/Swiss-Prot;Acc:P06525]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.