Factsheet for VIT_02s0025g02730.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400031884	Potato	cytosol	73.1	75.79
Solyc08g083280.2.1	Tomato	cytosol	72.33	74.8
AT1G32780.1	Thale cress	cytosol	71.57	71.57
KRH75885	Soybean	cytosol	71.57	70.85
CDY01241	Canola	cytosol	70.3	70.3
Bra023290.1-P	Field mustard	cytosol	70.05	70.05
CDX93818	Canola	cytosol	70.05	70.05
KRH75889	Soybean	cytosol	71.07	70.0
KRH00223	Soybean	cytosol, nucleus	69.29	68.77
KRH75888	Soybean	cytosol	23.86	68.61
KRH49366	Soybean	cytosol, nucleus	68.78	67.75
AT1G64710.1	Thale cress	cytosol	65.23	67.63
Bra010185.1-P	Field mustard	cytosol	43.15	67.19
CDY26918	Canola	cytosol	43.15	67.19
KRH65753	Soybean	cytosol	33.25	67.18
CDY59757	Canola	cytosol	64.72	67.11
Bra031208.1-P	Field mustard	cytosol	64.72	66.75
CDY13798	Canola	cytosol	64.72	66.75
TraesCS1D01G052200.1	Wheat	cytosol	66.75	66.75
TraesCS1B01G066400.1	Wheat	cytosol	66.75	66.75
GSMUA_Achr4P29520_001	Banana	cytosol	67.26	66.42
TraesCS1A01G050100.2	Wheat	cytosol	66.24	66.24
Os10t0159800-01	Rice	cytosol	67.01	65.51
EER91718	Sorghum	cytosol	65.23	65.23
EER91716	Sorghum	cytosol	64.21	63.25
KRH65755	Soybean	cytosol	35.53	62.78
Zm00001d030347_P001	Maize	vacuole	64.47	60.77
KRH65756	Soybean	cytosol	25.38	57.8
VIT_07s0005g04610.t01	Wine grape	cytosol	17.51	57.02
Zm00001d030348_P001	Maize	cytosol	60.91	56.34
VIT_04s0044g01130.t01	Wine grape	cytosol	50.25	52.11
VIT_18s0001g15410.t01	Wine grape	cytosol	50.25	52.11
VIT_04s0044g01110.t01	Wine grape	cytosol	49.24	51.05
VIT_16s0039g00320.t01	Wine grape	cytosol	47.72	49.6
VIT_07s0005g04600.t01	Wine grape	cytosol	29.7	49.58
KRH75887	Soybean	cytosol	24.37	48.98
VIT_18s0001g06360.t01	Wine grape	cytosol	47.97	48.84
CDX73269	Canola	cytosol	49.75	47.46
VIT_18s0001g00380.t01	Wine grape	cytosol	45.69	47.0
VIT_18s0001g15450.t01	Wine grape	mitochondrion	49.49	45.67
VIT_18s0001g00410.t01	Wine grape	cytosol	45.18	45.06
VIT_16s0039g01500.t01	Wine grape	cytosol	18.78	41.57
VIT_06s0004g04330.t01	Wine grape	cytosol	41.62	41.41
KRG88472	Soybean	cytosol	15.48	40.67
VIT_06s0004g04320.t01	Wine grape	mitochondrion, plastid	37.06	38.93
VIT_06s0004g04310.t01	Wine grape	plastid	36.04	37.47
VIT_04s0044g01120.t01	Wine grape	cytosol	50.25	33.56
VIT_07s0031g03150.t01	Wine grape	mitochondrion	27.16	25.42
VIT_16s0100g00300.t01	Wine grape	cytosol	23.1	24.93
VIT_16s0100g00290.t01	Wine grape	cytosol, endoplasmic reticulum, plasma membrane	23.35	11.93

Protein Annotations

EntrezGene:100256495	wikigene:100256495	Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:35.1	InterPro:ADH_C
InterPro:ADH_N	InterPro:ADH_Zn_CS	ProteinID:CBI34602	ProteinID:CBI34602.3	UniProt:D7TVS7	EMBL:FN596251
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270
GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	InterPro:GroES-like_sf	EntrezGene:LOC100256495	wikigene:LOC100256495
InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF08240	ScanProsite:PS00059	PANTHER:PTHR43880	PANTHER:PTHR43880:SF18
SUPFAM:SSF50129	SUPFAM:SSF51735	UniParc:UPI00015CC951	ArrayExpress:VIT_02s0025g02730	EnsemblPlantsGene:VIT_02s0025g02730	EnsemblPlants:VIT_02s0025g02730.t01
RefSeq:XP_002272348	RefSeq:XP_002272348.1	:	:	:	:

Description

No Description!

Coordinates

chr2:+:2368434..2370943

Molecular Weight (calculated)

43013.1 Da

IEP (calculated)

7.148

GRAVY (calculated)

-0.047

Length

394 amino acids

Sequence
(BLAST)

001: MQKPQGESVS GVHTESETTG KVITCKAAVV LGPGQPFVIE EIQVDPPQKM EVRVKILYTS ICHTDLSYWK GESEAYRVYP RILGHEAAGI VESVGEGVVD
101: MRKGDHVIPI FNGECGDCVY CKCDKTNLCE RFRVHPLRSV MVNDGNCRFS TKDGKPIFHF LNTSTFTEYT VLHSACVVKI DSKAPLKKMI LLSCGVSSGL
201: GAAWNTAKVQ AGSSVAIFGL GSVGLAAAEG ARTRGASKII GVDINPNKFI KGKAMGLTDF INPNDSKNPV HEIIQEMTGG GVDYSFECAG NLDVLREAFL
301: STHEGWGMTV LLGIHPTPRM LPIHPMELFD GRRIIGSVFG DFKGKTQLPH FAQQCMRGVV NLDEFITHEL PFEKINEAFQ LLADGKSLRC VLHL

Best Arabidopsis Sequence Match ( AT1G32780.1 )
(BLAST)

001: MAETQGKVIT CKAAVVWGPK VPLVIQEICV DPPQKMEVRV KILYSSICHT DLGCWNGTNE AERAFPRILG HEAVGIVESV GEGVKDVKEG DYVIPTFNGE
101: CGECKVCKRE ESNLCERYHV DPMKRVMVND GGTRFSTTIN KDGGSSQSQP IYHFLNTSTF TEYTVLDSAC VVKIDPNSPL KQMSLLSCGV STGVGAAWNI
201: ANVKEGKSTA VFGLGSVGLA VAEGARARGA SRIIGVDANA SKFEKGKLMG VTDFINPKDL TKPVHQMIRE ITGGGVDYSF ECTGNVDVLR EAFLSTHVGW
301: GSTVLVGIYP TPRTLPLHPM ELFDGRRITG SVFGGFKPKS QLPNFAQQCM KGVVKLEPFI TNELPFEKIN DAFQLLRDGK SLRCILQISK LLKR

Arabidopsis Description

Alcohol dehydrogenase-like 3 [Source:UniProtKB/Swiss-Prot;Acc:A1L4Y2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.