Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 1
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr1P05790_001 | Banana | cytosol, plasma membrane | 91.1 | 56.73 |
| TraesCS6D01G371200.1 | Wheat | golgi | 91.53 | 56.69 |
| PGSC0003DMT400019942 | Potato | cytosol | 90.68 | 56.46 |
| TraesCS6A01G386600.1 | Wheat | cytosol | 91.1 | 56.43 |
| TraesCS6B01G425700.1 | Wheat | cytosol | 91.1 | 56.43 |
| EES06008 | Sorghum | cytosol | 91.1 | 56.43 |
| Solyc09g064370.2.1 | Tomato | nucleus | 91.1 | 56.28 |
| KRG95774 | Soybean | cytosol, nucleus | 89.83 | 55.94 |
| KRH67486 | Soybean | nucleus | 89.83 | 55.94 |
| Os02t0815500-01 | Rice | plasma membrane, plastid | 90.25 | 55.91 |
| CDY22323 | Canola | cytosol | 89.41 | 55.67 |
| Bra033706.1-P | Field mustard | cytosol | 89.41 | 55.67 |
| CDY13136 | Canola | cytosol | 88.98 | 55.41 |
| CDX94738 | Canola | cytosol | 88.98 | 55.41 |
| CDY36960 | Canola | cytosol | 88.56 | 55.15 |
| KRH32257 | Soybean | cytosol | 88.56 | 55.0 |
| AT5G43940.2 | Thale cress | cytosol | 89.83 | 54.22 |
| Bra027516.1-P | Field mustard | extracellular | 88.14 | 51.23 |
| VIT_16s0039g01500.t01 | Wine grape | cytosol | 32.63 | 43.26 |
| HORVU6Hr1G090260.1 | Barley | cytosol | 91.53 | 43.03 |
| Zm00001d018468_P001 | Maize | plastid | 90.68 | 41.07 |
| VIT_18s0001g15410.t01 | Wine grape | cytosol | 58.47 | 36.32 |
| VIT_04s0044g01130.t01 | Wine grape | cytosol | 57.63 | 35.79 |
| VIT_04s0044g01110.t01 | Wine grape | cytosol | 56.78 | 35.26 |
| VIT_16s0039g00320.t01 | Wine grape | cytosol | 54.24 | 33.77 |
| VIT_18s0001g15450.t01 | Wine grape | mitochondrion | 57.2 | 31.62 |
| VIT_18s0001g00380.t01 | Wine grape | cytosol | 49.15 | 30.29 |
| VIT_02s0025g02730.t01 | Wine grape | cytosol | 49.58 | 29.7 |
| VIT_18s0001g00410.t01 | Wine grape | cytosol | 49.58 | 29.62 |
| VIT_18s0001g06360.t01 | Wine grape | cytosol | 47.88 | 29.2 |
| VIT_06s0004g04330.t01 | Wine grape | cytosol | 40.68 | 24.24 |
| VIT_04s0044g01120.t01 | Wine grape | cytosol | 57.63 | 23.05 |
| VIT_06s0004g04320.t01 | Wine grape | mitochondrion, plastid | 33.9 | 21.33 |
| VIT_06s0004g04310.t01 | Wine grape | plastid | 33.05 | 20.58 |
| VIT_16s0100g00300.t01 | Wine grape | cytosol | 24.58 | 15.89 |
| VIT_07s0031g03150.t01 | Wine grape | mitochondrion | 25.85 | 14.49 |
| VIT_16s0100g00290.t01 | Wine grape | cytosol, endoplasmic reticulum, plasma membrane | 25.0 | 7.65 |
| KRH19643 | Soybean | cytosol | 0.42 | 0.87 |
| VIT_07s0005g04610.t01 | Wine grape | cytosol | 0.0 | 0.0 |
Protein Annotations
| MapMan:18.7.1 | Gene3D:3.40.50.720 | Gene3D:3.90.180.10 | InterPro:ADH_C | ProteinID:CBI37211 | ProteinID:CBI37211.3 |
| UniProt:D7U394 | EMBL:FN596502 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0006069 |
| GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 | GO:GO:0009987 | GO:GO:0016491 |
| GO:GO:0046872 | GO:GO:0051903 | GO:GO:0055114 | InterPro:GroES-like_sf | InterPro:NAD(P)-bd_dom_sf | PFAM:PF00107 |
| PANTHER:PTHR43880 | PANTHER:PTHR43880:SF13 | SUPFAM:SSF50129 | SUPFAM:SSF51735 | UniParc:UPI0001BE49B3 | ArrayExpress:VIT_07s0005g04600 |
| EnsemblPlantsGene:VIT_07s0005g04600 | EnsemblPlants:VIT_07s0005g04600.t01 | unigene:Vvi.8173 | RefSeq:XP_002269325 | RefSeq:XP_002269325.2 | : |
Description
No Description!
Coordinates
chr7:-:7797582..7804445
Molecular Weight (calculated)
25166.4 Da
IEP (calculated)
6.501
GRAVY (calculated)
0.194
Length
236 amino acids
Sequence
(BLAST)
(BLAST)
001: MGTSTFSQYT VVHDVSVAKI DPVAPLEKVC LLGCGVPTGL GAVWNTAKVE SGSIVAVFGL GTVGLAVAEG AKSAGASRII GVDIDSKKFD VAKNFGVTEF
101: VNPKDHEKPI QQVLVDLTDG GVDYSFECIG NVSVMRAALE CCHKGWGTSV IVGVAASGQE ISTRPFQLVT GRVWKGTAFG GFKSRSQVPW LVEKYMKKEI
201: KVDEYITHNL TLGEINEAFD LMHEGGCLRC VLAMHV
101: VNPKDHEKPI QQVLVDLTDG GVDYSFECIG NVSVMRAALE CCHKGWGTSV IVGVAASGQE ISTRPFQLVT GRVWKGTAFG GFKSRSQVPW LVEKYMKKEI
201: KVDEYITHNL TLGEINEAFD LMHEGGCLRC VLAMHV
001: MSTTGQIIRC KAAVAWEAGK PLVIEEVEVA PPQKHEVRIK ILFTSLCHTD VYFWEAKGQT PLFPRIFGHE AGGIVESVGE GVTDLQPGDH VLPIFTGECG
101: ECRHCHSEES NMCDLLRINT ERGGMIHDGE SRFSINGKPI YHFLGTSTFS EYTVVHSGQV AKINPDAPLD KVCIVSCGLS TGLGATLNVA KPKKGQSVAI
201: FGLGAVGLGA AEGARIAGAS RIIGVDFNSK RFDQAKEFGV TECVNPKDHD KPIQQVIAEM TDGGVDRSVE CTGSVQAMIQ AFECVHDGWG VAVLVGVPSK
301: DDAFKTHPMN FLNERTLKGT FFGNYKPKTD IPGVVEKYMN KELELEKFIT HTVPFSEINK AFDYMLKGES IRCIITMGA
101: ECRHCHSEES NMCDLLRINT ERGGMIHDGE SRFSINGKPI YHFLGTSTFS EYTVVHSGQV AKINPDAPLD KVCIVSCGLS TGLGATLNVA KPKKGQSVAI
201: FGLGAVGLGA AEGARIAGAS RIIGVDFNSK RFDQAKEFGV TECVNPKDHD KPIQQVIAEM TDGGVDRSVE CTGSVQAMIQ AFECVHDGWG VAVLVGVPSK
301: DDAFKTHPMN FLNERTLKGT FFGNYKPKTD IPGVVEKYMN KELELEKFIT HTVPFSEINK AFDYMLKGES IRCIITMGA
Arabidopsis Description
ADH1Alcohol dehydrogenase class-P [Source:UniProtKB/Swiss-Prot;Acc:P06525]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.