Factsheet for VIT_07s0031g03150.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX89070	Canola	cytosol	43.71	80.7
GSMUA_Achr5P25890_001	Banana	cytosol	70.55	79.84
Solyc05g056540.2.1	Tomato	plastid	77.2	75.23
PGSC0003DMT400059936	Potato	plastid	77.2	75.23
CDX97482	Canola	cytosol	38.24	74.88
Zm00001d049716_P001	Maize	mitochondrion	73.87	74.58
TraesCS7B01G223100.1	Wheat	mitochondrion	73.4	74.46
TraesCS7A01G322200.1	Wheat	mitochondrion	73.4	74.46
TraesCS7D01G319100.1	Wheat	mitochondrion	73.16	74.22
KXG24208	Sorghum	mitochondrion	73.4	73.4
Zm00001d035032_P003	Maize	mitochondrion	72.45	73.32
KRH41009	Soybean	mitochondrion, plastid	73.87	72.83
AT5G63620.1	Thale cress	mitochondrion	73.63	72.6
KRH59676	Soybean	mitochondrion	73.16	72.3
Zm00001d036209_P001	Maize	cytosol	49.17	72.13
CDY41524	Canola	mitochondrion	74.35	71.95
Bra038649.1-P	Field mustard	mitochondrion	74.11	71.72
CDX84427	Canola	mitochondrion	73.87	71.49
Os08t0109200-01	Rice	mitochondrion	72.45	71.26
HORVU7Hr1G077200.1	Barley	mitochondrion	73.4	69.59
CDY30977	Canola	cytosol	46.08	66.9
CDX81190	Canola	cytosol	18.05	66.67
Bra037749.1-P	Field mustard	cytosol	27.55	62.03
VIT_07s0005g04610.t01	Wine grape	cytosol	9.74	33.88
VIT_16s0039g01500.t01	Wine grape	cytosol	12.35	29.21
VIT_18s0001g15410.t01	Wine grape	cytosol	26.37	29.21
VIT_04s0044g01130.t01	Wine grape	cytosol	25.89	28.68
VIT_18s0001g06360.t01	Wine grape	cytosol	25.89	28.17
VIT_04s0044g01110.t01	Wine grape	cytosol	25.42	28.16
VIT_18s0001g00410.t01	Wine grape	cytosol	26.37	28.1
VIT_16s0100g00300.t01	Wine grape	cytosol	23.99	27.67
VIT_16s0039g00320.t01	Wine grape	cytosol	24.7	27.44
VIT_18s0001g00380.t01	Wine grape	cytosol	24.94	27.42
VIT_02s0025g02730.t01	Wine grape	cytosol	25.42	27.16
VIT_18s0001g15450.t01	Wine grape	mitochondrion	26.84	26.46
VIT_06s0004g04320.t01	Wine grape	mitochondrion, plastid	23.04	25.87
VIT_07s0005g04600.t01	Wine grape	cytosol	14.49	25.85
VIT_06s0004g04330.t01	Wine grape	cytosol	23.75	25.25
VIT_06s0004g04310.t01	Wine grape	plastid	22.33	24.8
VIT_04s0044g01120.t01	Wine grape	cytosol	25.89	18.47
VIT_16s0100g00290.t01	Wine grape	cytosol, endoplasmic reticulum, plasma membrane	23.75	12.97

Protein Annotations

EntrezGene:100260980	wikigene:100260980	Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:35.1	InterPro:ADH_C
InterPro:ADH_N	ProteinID:CCB47181	ProteinID:CCB47181.1	UniProt:F6H4I9	EMBL:FN595233	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0010033	GO:GO:0016491
GO:GO:0050897	GO:GO:0055114	InterPro:GroES-like_sf	EntrezGene:LOC100260980	wikigene:LOC100260980	InterPro:NAD(P)-bd_dom_sf
PFAM:PF00107	PFAM:PF08240	InterPro:PKS_ER	PANTHER:PTHR43350	PANTHER:PTHR43350:SF8	SMART:SM00829
SUPFAM:SSF50129	SUPFAM:SSF51735	UniParc:UPI0001983A95	ArrayExpress:VIT_07s0031g03150	EnsemblPlantsGene:VIT_07s0031g03150	EnsemblPlants:VIT_07s0031g03150.t01
unigene:Vvi.24034	RefSeq:XP_002268625	RefSeq:XP_002268625.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr7:-:19954488..19970245

Molecular Weight (calculated)

45080.5 Da

IEP (calculated)

8.296

GRAVY (calculated)

0.025

Length

421 amino acids

Sequence
(BLAST)

001: MALLVRSLLR RSSSPSSSNP FSGGVGGAVW RRWMSQEAAG YHLSGGPAHM RGAVFWEVNR PLTIEDFHMP RPKAGEVLIK TKACGVCHSD LHVIKGELPF
101: ASPCVVGHEI TGEVVEHGPL TDTKITKRFP IGSRVVGAFI MPCGSCFFCN RGQDDLCEDF FAYNRAKGTL YDGETRLFLR NNGKPVFMYS MGGLAEYCVV
201: PAHGLTNLPD SLPYTESAIL GCAVFTAYGA MAHAAEVRPG NSVAVIGIGG VGSSCLQIAR AFGASDIIAV DVNDEKLENA KVFGASHTVN ALKEDVADKI
301: REITGGRGVD VAVEALGKPL TFAQCTQSVR DGGKAVMIGL TKSGAVGEID INRLVRRQIK VIGSYGARAR QDLPKLVKLA ETGIFNLKAA VSRKCEFEEV
401: GKAYQDLDQG KIVSRAVVEI M

Best Arabidopsis Sequence Match ( AT5G63620.1 )
(BLAST)

001: MAFAPILRRA SAVKNLFSLT RLAVGSALST RSLQTGASGD DSQSMGGYHV SPGGFMRGAV YREPNKPLTI EEFHIPRPKS NEILIKTKAC GVCHSDLHVM
101: KGEIPFASPC VIGHEITGEV VEHGPLTDHK IINRFPIGSR VVGAFIMPCG TCSYCAKGHD DLCEDFFAYN RAKGTLYDGE TRLFLRHDDS PVYMYSMGGM
201: AEYCVTPAHG LAPLPESLPY SESAILGCAV FTAYGAMAHA AEIRPGDSIA VIGIGGVGSS CLQIARAFGA SDIIAVDVQD DKLQKAKTLG ATHIVNAAKE
301: DAVERIREIT GGMGVDVAVE ALGKPQTFMQ CTLSVKDGGK AVMIGLSQAG SVGEIDINRL VRRKIKVIGS YGGRARQDLP KVVKLAESGI FNLTNAVSSK
401: YKFEDAGKAF QDLNEGKIVS RGVVEIL

Arabidopsis Description

At5g63620/MBK5_9 [Source:UniProtKB/TrEMBL;Acc:Q93ZM6]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.