Factsheet for VIT_16s0039g01500.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_07s0005g04600.t01	Wine grape	cytosol	43.26	32.63
VIT_06s0004g04330.t01	Wine grape	cytosol	72.47	32.58
VIT_06s0004g04310.t01	Wine grape	plastid	66.29	31.13
PGSC0003DMT400038526	Potato	cytosol	51.12	29.93
PGSC0003DMT400038529	Potato	cytosol	51.69	28.75
VIT_06s0004g04320.t01	Wine grape	mitochondrion, plastid	58.99	28.0
KRH23997	Soybean	cytosol	56.18	27.62
KRH23989	Soybean	cytosol	54.49	25.87
KRH23996	Soybean	cytosol	54.49	25.87
KRH23995	Soybean	nucleus	54.49	25.8
PGSC0003DMT400038525	Potato	cytosol	52.81	24.93
Solyc03g044200.2.1	Tomato	cytosol	52.25	24.67
Solyc11g071290.1.1	Tomato	cytosol	51.12	24.2
PGSC0003DMT400047760	Potato	cytosol	50.56	24.06
VIT_18s0001g06360.t01	Wine grape	cytosol	44.38	20.41
VIT_04s0044g01110.t01	Wine grape	cytosol	42.7	20.0
KRH23988	Soybean	endoplasmic reticulum, extracellular	10.11	20.0
VIT_18s0001g15410.t01	Wine grape	cytosol	42.13	19.74
VIT_04s0044g01130.t01	Wine grape	cytosol	41.57	19.47
VIT_18s0001g00380.t01	Wine grape	cytosol	41.57	19.32
VIT_18s0001g00410.t01	Wine grape	cytosol	42.7	19.24
VIT_16s0039g00320.t01	Wine grape	cytosol	40.45	19.0
VIT_02s0025g02730.t01	Wine grape	cytosol	41.57	18.78
VIT_18s0001g15450.t01	Wine grape	mitochondrion	41.57	17.33
VIT_04s0044g01120.t01	Wine grape	cytosol	41.57	12.54
VIT_07s0031g03150.t01	Wine grape	mitochondrion	29.21	12.35
VIT_16s0100g00300.t01	Wine grape	cytosol	23.03	11.23
VIT_16s0100g00290.t01	Wine grape	cytosol, endoplasmic reticulum, plasma membrane	23.6	5.45
VIT_07s0005g04610.t01	Wine grape	cytosol	0.56	0.83

Protein Annotations

ArrayExpress:VIT_16s0039g01500	EMBL:FN595750	EnsemblPlants:VIT_16s0039g01500.t01	EnsemblPlantsGene:VIT_16s0039g01500	Gene3D:3.40.50.720	Gene3D:3.90.180.10
GO:GO:0008150	GO:GO:0008152	GO:GO:0055114	InterPro:ADH_C	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR43880
PANTHER:PTHR43880:SF19	PFAM:PF00107	ProteinID:CCB50579	ProteinID:CCB50579.1	SEG:seg	SUPFAM:SSF51735
UniParc:UPI0002108D7C	UniProt:F6HED3	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr16:-:1096878..1098082

Molecular Weight (calculated)

18698.8 Da

IEP (calculated)

8.467

GRAVY (calculated)

0.173

Length

178 amino acids

Sequence
(BLAST)

001: MADASFISCG FSTGYGAAWK EAKVEKGSSI AVQGLGPVGL GVLVGARIQG ATRIIGIDII ERKRELGKAF GMTDFINPSE SDKTISQLVK ELTEGEGVDY
101: SFECTGYMNL INEALQATKA GKGMLTVVGA GKNAPVQIDF MTLIAGRTMK GSIFGGIKVQ SGIPVIVEKC INKASSIW

Best Arabidopsis Sequence Match ( AT1G22430.1 )
(BLAST)

001: MDKTFFSSNE GKPITCKAAI CRKAGEALVI EDIHVDPPQA YEVRIKILCT SLCHTDLTFW KLSFGPISRF PRILGHEAVG VVESIGENVD GFKQGDVVLP
101: VFHPYCEECK DCKSSKTNWC DRYAEDFISN TRRYGMASRF KDSSGEVIHH FLFVSSFSEY TVVDIAHLVK ISPEIPVDKA ALLSCGVSTG IGAAWKVANV
201: EEGSTIAIFG LGAVGLAVAE GARLRGAAKI IGIDTNSDKF ELGKKFGFTD FINPTLCGEK KISEVIKEMT EGGVDYSFEC VGLASLLNEA FISTRTGTGK
301: TVMLGMEKHA APISLGSFDL LRGRVICGSL FGGLKSKLDI PILVDHYLKK ELNLDSFITH ELNFKEINKA FALLEEGKSL RCILWMDK

Arabidopsis Description

Alcohol dehydrogenase-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SK86]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.