Factsheet for PGSC0003DMT400038525

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400038526	Potato	cytosol	74.8	92.76
Solyc03g044200.2.1	Tomato	cytosol	92.04	92.04
PGSC0003DMT400038529	Potato	cytosol	77.98	91.88
PGSC0003DMT400047760	Potato	cytosol	63.93	64.44
KRH23989	Soybean	cytosol	57.03	57.33
KRH23996	Soybean	cytosol	57.03	57.33
KRH23997	Soybean	cytosol	54.91	57.18
KRH23995	Soybean	nucleus	56.76	56.91
VIT_06s0004g04330.t01	Wine grape	cytosol	59.42	56.57
VIT_06s0004g04320.t01	Wine grape	mitochondrion, plastid	56.23	56.53
VIT_16s0039g01500.t01	Wine grape	cytosol	24.93	52.81
VIT_06s0004g04310.t01	Wine grape	plastid	52.25	51.98
PGSC0003DMT400019942	Potato	cytosol	44.83	44.59
PGSC0003DMT400031884	Potato	cytosol	43.24	42.89
PGSC0003DMT400079175	Potato	cytosol	44.03	42.89
PGSC0003DMT400079071	Potato	cytosol	42.97	42.63
PGSC0003DMT400025617	Potato	cytosol	43.24	42.01
PGSC0003DMT400063937	Potato	cytosol	42.18	41.95
PGSC0003DMT400075618	Potato	cytosol	43.24	41.9
KRH23988	Soybean	endoplasmic reticulum, extracellular	9.81	41.11
PGSC0003DMT400059936	Potato	plastid	28.65	25.0
PGSC0003DMT400081907	Potato	cytosol	22.28	24.28
PGSC0003DMT400065063	Potato	cytosol	21.49	22.82

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:35.1	InterPro:ADH_C	InterPro:ADH_N	InterPro:ADH_Zn_CS
ProteinID:CAA63093	ProteinID:CAA63093.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004022	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114
InterPro:GroES-like_sf	UniProt:M1B712	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF08240	EnsemblPlantsGene:PGSC0003DMG400014870
PGSC:PGSC0003DMG400014870	EnsemblPlants:PGSC0003DMT400038525	InterPro:PKS_ER	ScanProsite:PS00059	PANTHER:PTHR43880	PANTHER:PTHR43880:SF19
SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735	UniParc:UPI0002969F6F	EMBL:X92179	SEG:seg

Description

Alcohol dehydrogenase [Source:PGSC_GENE;Acc:PGSC0003DMG400014870]

Coordinates

chr3:+:7526577..7530327

Molecular Weight (calculated)

41102.1 Da

IEP (calculated)

6.818

GRAVY (calculated)

0.045

Length

377 amino acids

Sequence
(BLAST)

001: MDSSSPKVIT CKAAVVWKEG EMIKIEDIQV DPPKSNEVRI KMLFASLCHT DILTTNGFPY PLFPRVLGHE GVGMIESVGE NVTNLKEGDI VMPLYLGECK
101: ECPNCKSGKS NLCHKYHLTF SGLMLDDTSR MSIHGGQVLY HSFSCSTWSE YTVINANYVI KVDPKKIPLQ HASLLCCGFT TGYGATWREV HVEKGSTVAV
201: LGLGVVGLGA IEGARSQGAS KIIGVDINES KRGKGELFGM TDFINPKESR TSVSEMIKDV TEGLGVDYVF ECTGIPSMLN EAIEASKLGI GTIVVIGAGH
301: GLTREFNLVP LLCGRTLKGS IYGGIRLHSD LPAILHRCAT KEIQLNDLIT HQISLTEINQ SFELLKDPHC VKIIIKF

Best Arabidopsis Sequence Match ( AT1G22430.1 )
(BLAST)

001: MDKTFFSSNE GKPITCKAAI CRKAGEALVI EDIHVDPPQA YEVRIKILCT SLCHTDLTFW KLSFGPISRF PRILGHEAVG VVESIGENVD GFKQGDVVLP
101: VFHPYCEECK DCKSSKTNWC DRYAEDFISN TRRYGMASRF KDSSGEVIHH FLFVSSFSEY TVVDIAHLVK ISPEIPVDKA ALLSCGVSTG IGAAWKVANV
201: EEGSTIAIFG LGAVGLAVAE GARLRGAAKI IGIDTNSDKF ELGKKFGFTD FINPTLCGEK KISEVIKEMT EGGVDYSFEC VGLASLLNEA FISTRTGTGK
301: TVMLGMEKHA APISLGSFDL LRGRVICGSL FGGLKSKLDI PILVDHYLKK ELNLDSFITH ELNFKEINKA FALLEEGKSL RCILWMDK

Arabidopsis Description

Alcohol dehydrogenase-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SK86]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.