Factsheet for VIT_06s0004g04320.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 5
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_06s0004g04310.t01	Wine grape	plastid	84.0	83.11
VIT_06s0004g04330.t01	Wine grape	cytosol	74.4	70.45
VIT_16s0039g01500.t01	Wine grape	cytosol	28.0	58.99
PGSC0003DMT400038525	Potato	cytosol	56.53	56.23
KRH23995	Soybean	nucleus	55.73	55.59
KRH23989	Soybean	cytosol	54.67	54.67
KRH23996	Soybean	cytosol	54.67	54.67
Solyc03g044200.2.1	Tomato	cytosol	54.93	54.64
KRH23997	Soybean	cytosol	51.2	53.04
PGSC0003DMT400038529	Potato	cytosol	44.8	52.5
PGSC0003DMT400038526	Potato	cytosol	42.4	52.3
PGSC0003DMT400047760	Potato	cytosol	50.13	50.27
Solyc11g071290.1.1	Tomato	cytosol	50.13	50.0
VIT_07s0005g04610.t01	Wine grape	cytosol	15.47	47.93
KRH23988	Soybean	endoplasmic reticulum, extracellular	10.13	42.22
VIT_18s0001g15410.t01	Wine grape	cytosol	40.0	39.47
VIT_18s0001g06360.t01	Wine grape	cytosol	40.53	39.28
VIT_04s0044g01130.t01	Wine grape	cytosol	39.73	39.21
VIT_04s0044g01110.t01	Wine grape	cytosol	39.47	38.95
VIT_18s0001g00380.t01	Wine grape	cytosol	39.73	38.9
VIT_16s0039g00320.t01	Wine grape	cytosol	37.87	37.47
VIT_02s0025g02730.t01	Wine grape	cytosol	38.93	37.06
VIT_18s0001g00410.t01	Wine grape	cytosol	38.13	36.2
VIT_18s0001g15450.t01	Wine grape	mitochondrion	39.2	34.43
VIT_07s0005g04600.t01	Wine grape	cytosol	21.33	33.9
VIT_04s0044g01120.t01	Wine grape	cytosol	39.73	25.25
VIT_07s0031g03150.t01	Wine grape	mitochondrion	25.87	23.04
VIT_16s0100g00300.t01	Wine grape	cytosol	20.27	20.82
VIT_16s0100g00290.t01	Wine grape	cytosol, endoplasmic reticulum, plasma membrane	20.53	9.99

Protein Annotations

Gene3D:3.40.50.720	MapMan:35.1	InterPro:ADH_N	InterPro:ADH_Zn_CS	ProteinID:CBI16173	ProteinID:CBI16173.3
UniProt:D7SKJ6	EMBL:FN594951	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0008270	GO:GO:0016491	GO:GO:0055114	InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf
PFAM:PF08240	InterPro:PKS_ER	ScanProsite:PS00059	PANTHER:PTHR43880	PANTHER:PTHR43880:SF19	SMART:SM00829
SUPFAM:SSF50129	SUPFAM:SSF51735	UniParc:UPI0001BE0EDC	ArrayExpress:VIT_06s0004g04320	EnsemblPlantsGene:VIT_06s0004g04320	EnsemblPlants:VIT_06s0004g04320.t01
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr6:+:5298004..5302347

Molecular Weight (calculated)

40870.2 Da

IEP (calculated)

8.584

GRAVY (calculated)

0.088

Length

375 amino acids

Sequence
(BLAST)

001: MKMHIRSILS SYLTRKPISK SPIFRSLGQN HFFTSSTSRS NQVITCKAAV CWGAGEAVKV EEIQVEPPKS SEVRVKMLYA SICHTDILYC SGFPLPLFPR
101: VPGHEGVGMV ESVGENVIAL KEGDLVIPTY LGECGECENC RSGKTNLCLE HPLTLNGLML DGTSRMSIRG QRLYHLFSCS TWAGYMVVNA NYLVKIDSRI
201: ALSEASFLSC GFSTGYGAAW KEAKVEKGSS VAVLGLGAVG LGVLEGARNQ GAARIIGIDK NERKREMGKT FGMTDFINPI LQTTKVGKGM LIVIGAGNKA
301: SVDINFLTLL LGRTINGCIF GGIKVQSDIP LLVNKCINKE IQLDDLLTNE IQLEEIKKAY ELLKQPDCIK VLIKI

Best Arabidopsis Sequence Match ( AT1G22430.1 )
(BLAST)

001: MDKTFFSSNE GKPITCKAAI CRKAGEALVI EDIHVDPPQA YEVRIKILCT SLCHTDLTFW KLSFGPISRF PRILGHEAVG VVESIGENVD GFKQGDVVLP
101: VFHPYCEECK DCKSSKTNWC DRYAEDFISN TRRYGMASRF KDSSGEVIHH FLFVSSFSEY TVVDIAHLVK ISPEIPVDKA ALLSCGVSTG IGAAWKVANV
201: EEGSTIAIFG LGAVGLAVAE GARLRGAAKI IGIDTNSDKF ELGKKFGFTD FINPTLCGEK KISEVIKEMT EGGVDYSFEC VGLASLLNEA FISTRTGTGK
301: TVMLGMEKHA APISLGSFDL LRGRVICGSL FGGLKSKLDI PILVDHYLKK ELNLDSFITH ELNFKEINKA FALLEEGKSL RCILWMDK

Arabidopsis Description

Alcohol dehydrogenase-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SK86]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.