Factsheet for VIT_04s0044g01120.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_04s0044g01130.t01	Wine grape	cytosol	63.9	99.21
VIT_04s0044g01110.t01	Wine grape	cytosol	62.88	97.63
KRH64058	Soybean	cytosol, endoplasmic reticulum	58.81	91.08
VIT_18s0001g15410.t01	Wine grape	cytosol	57.29	88.95
VIT_18s0001g15450.t01	Wine grape	mitochondrion	57.63	79.63
VIT_07s0005g04610.t01	Wine grape	cytosol	13.56	66.12
VIT_07s0005g04600.t01	Wine grape	cytosol	23.05	57.63
VIT_16s0039g00320.t01	Wine grape	cytosol	35.42	55.15
VIT_18s0001g06360.t01	Wine grape	cytosol	33.56	51.16
VIT_02s0025g02730.t01	Wine grape	cytosol	33.56	50.25
VIT_18s0001g00380.t01	Wine grape	cytosol	31.86	49.09
VIT_18s0001g00410.t01	Wine grape	cytosol	31.86	47.59
VIT_16s0039g01500.t01	Wine grape	cytosol	12.54	41.57
VIT_06s0004g04330.t01	Wine grape	cytosol	27.12	40.4
VIT_06s0004g04320.t01	Wine grape	mitochondrion, plastid	25.25	39.73
VIT_06s0004g04310.t01	Wine grape	plastid	24.75	38.52
VIT_07s0031g03150.t01	Wine grape	mitochondrion	18.47	25.89
VIT_16s0100g00300.t01	Wine grape	cytosol	15.59	25.21
VIT_16s0100g00290.t01	Wine grape	cytosol, endoplasmic reticulum, plasma membrane	15.42	11.8

Protein Annotations

EntrezGene:100267821	wikigene:100267821	MapMan:3.11.1.2	Gene3D:3.40.50.720	Gene3D:3.90.180.10	InterPro:ADH_C
InterPro:ADH_N	InterPro:ADH_Zn_CS	EMBL:AM450576	ProteinID:CAN80915	ProteinID:CAN80915.1	ProteinID:CCB60422
ProteinID:CCB60422.1	UniProt:F6I0F6	EMBL:FN596506	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114
InterPro:GroES-like_sf	EntrezGene:LOC100267821	wikigene:LOC100267821	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF08240
ScanProsite:PS00059	PANTHER:PTHR43880	PANTHER:PTHR43880:SF9	SUPFAM:SSF50129	SUPFAM:SSF51735	UniParc:UPI000210971E
ArrayExpress:VIT_04s0044g01120	EnsemblPlantsGene:VIT_04s0044g01120	EnsemblPlants:VIT_04s0044g01120.t01	SEG:seg	:	:

Description

No Description!

Coordinates

chr4:+:22463343..22470471

Molecular Weight (calculated)

63714.9 Da

IEP (calculated)

6.501

GRAVY (calculated)

0.033

Length

590 amino acids

Sequence
(BLAST)

001: MSGTAGQVIR CKAAVAWEAG KPLVIEEVEV APPQAMEVRL KILFTSLCHT DVYFWEAKGQ TPLFPRIFGH EAGGIVESVG EGVTDLQPGD HVLPVFTGEC
101: KDCRHCKSEE SNMCDLLRIN TDRGVMLNDN KSRFSINGKP IYHFVGTSTF SEYTVVHVGC VAKINPAAPL DKVCVLSCGI STGLGATLNV ARPWKGSSVA
201: IFGLGAVGLA MSSTAGQVIR CKAAVAWEAG KPLVIEEVEV APPQVMEVRL KILFTSLCHT DVYFWEAKGQ TPLFPRIFGH EAGGIVESVG EGVTDLQPGD
301: HVLPVFTGEC KECRHCKSEE SNMCDLLRIN TDRGVMLSDN KSRFSINGKP IYHFVGTSTF SEYTVVHVGC VAKINPAAPL DKVCVLSCGI STGLGATLNV
401: AKPWKGSSVA IFGLGAVGLA AAEGARIAGA SRIIGIDLNP KRFNDAKKFG VTEFVNPKDH DKPVQEVIAE MTDGGVDRSV ECTGNVNAMI SAFECVHDGW
501: GVAVLVGVPN KDDSFKTHPV NLLNERTLKG TFFGNYKPRS DLPSVVEKYM NKELELEKFI THEVPFAEIN KAFEYMLSGD GLRCIIRMNA

Best Arabidopsis Sequence Match ( AT1G77120.1 )
(BLAST)

001: MSTTGQIIRC KAAVAWEAGK PLVIEEVEVA PPQKHEVRIK ILFTSLCHTD VYFWEAKGQT PLFPRIFGHE AGGIVESVGE GVTDLQPGDH VLPIFTGECG
101: ECRHCHSEES NMCDLLRINT ERGGMIHDGE SRFSINGKPI YHFLGTSTFS EYTVVHSGQV AKINPDAPLD KVCIVSCGLS TGLGATLNVA KPKKGQSVAI
201: FGLGAVGLGA AEGARIAGAS RIIGVDFNSK RFDQAKEFGV TECVNPKDHD KPIQQVIAEM TDGGVDRSVE CTGSVQAMIQ AFECVHDGWG VAVLVGVPSK
301: DDAFKTHPMN FLNERTLKGT FFGNYKPKTD IPGVVEKYMN KELELEKFIT HTVPFSEINK AFDYMLKGES IRCIITMGA

Arabidopsis Description

ADH1Alcohol dehydrogenase class-P [Source:UniProtKB/Swiss-Prot;Acc:P06525]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.