Factsheet for VIT_04s0044g01110.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_04s0044g01130.t01	Wine grape	cytosol	97.37	97.37
KRH64058	Soybean	cytosol, endoplasmic reticulum	89.74	89.5
VIT_18s0001g15410.t01	Wine grape	cytosol	88.68	88.68
VIT_18s0001g15450.t01	Wine grape	mitochondrion	85.53	76.11
VIT_07s0005g04610.t01	Wine grape	cytosol	21.05	66.12
VIT_04s0044g01120.t01	Wine grape	cytosol	97.63	62.88
VIT_07s0005g04600.t01	Wine grape	cytosol	35.26	56.78
VIT_16s0039g00320.t01	Wine grape	cytosol	53.42	53.56
VIT_18s0001g06360.t01	Wine grape	cytosol	51.32	50.39
VIT_02s0025g02730.t01	Wine grape	cytosol	51.05	49.24
VIT_18s0001g00380.t01	Wine grape	cytosol	48.68	48.3
VIT_18s0001g00410.t01	Wine grape	cytosol	48.42	46.58
VIT_16s0039g01500.t01	Wine grape	cytosol	20.0	42.7
VIT_06s0004g04330.t01	Wine grape	cytosol	42.37	40.66
VIT_06s0004g04320.t01	Wine grape	mitochondrion, plastid	38.95	39.47
VIT_06s0004g04310.t01	Wine grape	plastid	38.95	39.05
VIT_07s0031g03150.t01	Wine grape	mitochondrion	28.16	25.42
VIT_16s0100g00300.t01	Wine grape	cytosol	23.95	24.93
VIT_16s0100g00290.t01	Wine grape	cytosol, endoplasmic reticulum, plasma membrane	23.68	11.67

Protein Annotations

EntrezGene:100232854	wikigene:100232854	MapMan:3.11.1.2	Gene3D:3.40.50.720	Gene3D:3.90.180.10	UniProt:A5C0I8
ProteinID:AAF44335	ProteinID:AAF44335.1	ProteinID:AAG01382	ProteinID:AAG01382.1	ProteinID:AAL55726	ProteinID:AAL55726.1
EntrezGene:ADH2	wikigene:ADH2	InterPro:ADH_C	InterPro:ADH_N	InterPro:ADH_Zn_CS	EMBL:AF194174
EMBL:AF195866	EMBL:AF271074	EMBL:AM477788	ProteinID:CAN68504	ProteinID:CAN68504.1	ProteinID:CBI37556
ProteinID:CBI37556.3	EMBL:FN596506	GO:GO:0003674	GO:GO:0003824	GO:GO:0004022	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114
InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF08240	ScanProsite:PS00059	PANTHER:PTHR43880
PANTHER:PTHR43880:SF9	SUPFAM:SSF50129	SUPFAM:SSF51735	TIGR:TC51761	TIGR:TC64382	TIGR:TC69306
UniParc:UPI0001522171	ArrayExpress:VIT_04s0044g01110	EnsemblPlantsGene:VIT_04s0044g01110	EnsemblPlants:VIT_04s0044g01110.t01	unigene:Vvi.11219	unigene:Vvi.25902
RefSeq:XP_002281334	RefSeq:XP_002281334.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr4:+:22455944..22458732

Molecular Weight (calculated)

41124.6 Da

IEP (calculated)

6.348

GRAVY (calculated)

-0.014

Length

380 amino acids

Sequence
(BLAST)

001: MSSTAGQVIR CKAAVAWEAG KPLVIEEVEV APPQVMEVRL KILFTSLCHT DVYFWEAKGQ TPLFPRIFGH EAGGIVESVG EGVTDLQPGD HVLPVFTGEC
101: KECRHCKSEE SNMCDLLRIN TDRGVMLSDN KSRFSINGKP VYHFVGTSTF SEYTVVHVGC VAKINPAAPL DKVCVLSCGI STGLGATLNV AKPSKGSSIA
201: IFGLGAVGLA AAEGARIAGA ARIIGIDLNP KRFNDAKKFG VTEFLNPKDH DKPIQEVIAE MTGGGVDRSV ECTGNVNAMI SAFECVHDGW GVAVLVGVPN
301: KDDSFKTHPV NLLNERTLKG TFFGNYKPRS DLPSVVEKYM NKELEVEKFI THEVPFAEIN KAFEYMLSGD GLRCIIRMDA

Best Arabidopsis Sequence Match ( AT1G77120.1 )
(BLAST)

001: MSTTGQIIRC KAAVAWEAGK PLVIEEVEVA PPQKHEVRIK ILFTSLCHTD VYFWEAKGQT PLFPRIFGHE AGGIVESVGE GVTDLQPGDH VLPIFTGECG
101: ECRHCHSEES NMCDLLRINT ERGGMIHDGE SRFSINGKPI YHFLGTSTFS EYTVVHSGQV AKINPDAPLD KVCIVSCGLS TGLGATLNVA KPKKGQSVAI
201: FGLGAVGLGA AEGARIAGAS RIIGVDFNSK RFDQAKEFGV TECVNPKDHD KPIQQVIAEM TDGGVDRSVE CTGSVQAMIQ AFECVHDGWG VAVLVGVPSK
301: DDAFKTHPMN FLNERTLKGT FFGNYKPKTD IPGVVEKYMN KELELEKFIT HTVPFSEINK AFDYMLKGES IRCIITMGA

Arabidopsis Description

ADH1Alcohol dehydrogenase class-P [Source:UniProtKB/Swiss-Prot;Acc:P06525]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.