Factsheet for VIT_06s0004g04330.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 6
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_06s0004g04320.t01	Wine grape	mitochondrion, plastid	70.45	74.4
VIT_16s0039g01500.t01	Wine grape	cytosol	32.58	72.47
VIT_06s0004g04310.t01	Wine grape	plastid	67.17	70.18
KRH23989	Soybean	cytosol	59.85	63.2
KRH23996	Soybean	cytosol	59.85	63.2
KRH23995	Soybean	nucleus	59.09	62.23
KRH23997	Soybean	cytosol	56.82	62.15
PGSC0003DMT400038525	Potato	cytosol	56.57	59.42
PGSC0003DMT400038526	Potato	cytosol	45.2	58.88
Solyc03g044200.2.1	Tomato	cytosol	55.05	57.82
PGSC0003DMT400038529	Potato	cytosol	46.72	57.81
PGSC0003DMT400047760	Potato	cytosol	53.03	56.15
Solyc11g071290.1.1	Tomato	cytosol	53.03	55.85
KRH23988	Soybean	endoplasmic reticulum, extracellular	11.11	48.89
VIT_07s0005g04610.t01	Wine grape	cytosol	13.89	45.45
VIT_18s0001g00380.t01	Wine grape	cytosol	42.17	43.6
VIT_18s0001g06360.t01	Wine grape	cytosol	42.42	43.41
VIT_18s0001g15410.t01	Wine grape	cytosol	41.16	42.89
VIT_04s0044g01110.t01	Wine grape	cytosol	40.66	42.37
VIT_04s0044g01130.t01	Wine grape	cytosol	40.4	42.11
VIT_02s0025g02730.t01	Wine grape	cytosol	41.41	41.62
VIT_16s0039g00320.t01	Wine grape	cytosol	39.14	40.9
VIT_07s0005g04600.t01	Wine grape	cytosol	24.24	40.68
VIT_18s0001g00410.t01	Wine grape	cytosol	39.9	40.0
VIT_18s0001g15450.t01	Wine grape	mitochondrion	40.91	37.94
VIT_04s0044g01120.t01	Wine grape	cytosol	40.4	27.12
VIT_07s0031g03150.t01	Wine grape	mitochondrion	25.25	23.75
VIT_16s0100g00300.t01	Wine grape	cytosol	21.21	23.01
VIT_16s0100g00290.t01	Wine grape	cytosol, endoplasmic reticulum, plasma membrane	21.46	11.02

Protein Annotations

EntrezGene:100250105	wikigene:100250105	Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:35.1	InterPro:ADH_C
InterPro:ADH_N	InterPro:ADH_Zn_CS	ProteinID:CCB43592	ProteinID:CCB43592.1	UniProt:F6GV33	EMBL:FN594951
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270
GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	InterPro:GroES-like_sf	EntrezGene:LOC100250105	wikigene:LOC100250105
InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF08240	InterPro:PKS_ER	ScanProsite:PS00059	PANTHER:PTHR43880
PANTHER:PTHR43880:SF19	SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735	UniParc:UPI0002109CD9	ArrayExpress:VIT_06s0004g04330
EnsemblPlantsGene:VIT_06s0004g04330	EnsemblPlants:VIT_06s0004g04330.t01	RefSeq:XP_002281265	RefSeq:XP_002281265.1	SEG:seg	:

Description

No Description!

Coordinates

chr6:+:5308774..5311089

Molecular Weight (calculated)

42472.4 Da

IEP (calculated)

5.487

GRAVY (calculated)

0.035

Length

396 amino acids

Sequence
(BLAST)

001: MSVSSRLSPG QSDIPTNAAA RANEVITCKA AVCWGLGEAM KVEEIQVEPP KSSEVRVKML YASICHTDIF YCSELSLPMF PKVPGHEGVG VVESVGENVT
101: GLKEGDVVIP TYLGECGECE NCRSPKTNVC LKHPVTFTGL MPDGTSRMSI RGQRLHHIFS CSTWTEYMVV NANYLVKIDP RIAPSDASFL SCGFSTGYGA
201: AWKDAKVEKG SSVAVLGLGA VGLGVLQGAR NQGAARIIGI DKNERRREVG EAFGMTDFIN PNESNKSISE LVNELTGGQG VDYSFECTGI PSLVNEALQA
301: TKVGKGMSMV LGIANVPTVD ISLMALLSGK TLKGCFFGGI KVQSDIPVIV DKCINKASSL DIQLDELLTH EVQLEDMNKA FELLKQPDCV KVLIKI

Best Arabidopsis Sequence Match ( AT1G22430.1 )
(BLAST)

001: MDKTFFSSNE GKPITCKAAI CRKAGEALVI EDIHVDPPQA YEVRIKILCT SLCHTDLTFW KLSFGPISRF PRILGHEAVG VVESIGENVD GFKQGDVVLP
101: VFHPYCEECK DCKSSKTNWC DRYAEDFISN TRRYGMASRF KDSSGEVIHH FLFVSSFSEY TVVDIAHLVK ISPEIPVDKA ALLSCGVSTG IGAAWKVANV
201: EEGSTIAIFG LGAVGLAVAE GARLRGAAKI IGIDTNSDKF ELGKKFGFTD FINPTLCGEK KISEVIKEMT EGGVDYSFEC VGLASLLNEA FISTRTGTGK
301: TVMLGMEKHA APISLGSFDL LRGRVICGSL FGGLKSKLDI PILVDHYLKK ELNLDSFITH ELNFKEINKA FALLEEGKSL RCILWMDK

Arabidopsis Description

Alcohol dehydrogenase-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SK86]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.