Factsheet for PGSC0003DMT400047760

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc11g071290.1.1	Tomato	cytosol	97.86	97.34
PGSC0003DMT400038525	Potato	cytosol	64.44	63.93
PGSC0003DMT400038526	Potato	cytosol	50.27	61.84
PGSC0003DMT400038529	Potato	cytosol	52.41	61.25
VIT_06s0004g04330.t01	Wine grape	cytosol	56.15	53.03
KRH23997	Soybean	cytosol	50.53	52.21
KRH23989	Soybean	cytosol	51.87	51.73
KRH23996	Soybean	cytosol	51.87	51.73
KRH23995	Soybean	nucleus	51.07	50.8
VIT_16s0039g01500.t01	Wine grape	cytosol	24.06	50.56
VIT_06s0004g04320.t01	Wine grape	mitochondrion, plastid	50.27	50.13
VIT_06s0004g04310.t01	Wine grape	plastid	47.59	46.97
KRH23988	Soybean	endoplasmic reticulum, extracellular	10.7	44.44
PGSC0003DMT400075618	Potato	cytosol	43.85	42.16
PGSC0003DMT400079175	Potato	cytosol	43.32	41.86
PGSC0003DMT400025617	Potato	cytosol	43.32	41.75
PGSC0003DMT400019942	Potato	cytosol	41.18	40.63
PGSC0003DMT400063937	Potato	cytosol	40.64	40.11
PGSC0003DMT400031884	Potato	cytosol	40.37	39.74
PGSC0003DMT400079071	Potato	cytosol	40.37	39.74
PGSC0003DMT400081907	Potato	cytosol	23.26	25.14
PGSC0003DMT400059936	Potato	plastid	27.54	23.84
PGSC0003DMT400065063	Potato	cytosol	22.46	23.66

Protein Annotations

EntrezGene:102587003	Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:35.1	InterPro:ADH_C	InterPro:ADH_N
GO:GO:0008150	GO:GO:0008152	GO:GO:0055114	InterPro:GroES-like_sf	UniProt:M1BLD8	InterPro:NAD(P)-bd_dom_sf
PFAM:PF00107	PFAM:PF08240	EnsemblPlantsGene:PGSC0003DMG400018565	PGSC:PGSC0003DMG400018565	EnsemblPlants:PGSC0003DMT400047760	PANTHER:PTHR43880
PANTHER:PTHR43880:SF19	SUPFAM:SSF50129	SUPFAM:SSF51735	UniParc:UPI000294A389	RefSeq:XP_006340267.1	SEG:seg

Description

Alcohol dehydrogenase [Source:PGSC_GENE;Acc:PGSC0003DMG400018565]

Coordinates

chr11:+:42635665..42641679

Molecular Weight (calculated)

41106.0 Da

IEP (calculated)

6.183

GRAVY (calculated)

0.016

Length

374 amino acids

Sequence
(BLAST)

001: MNSSNHRVIT CKGAVVWKSG DELKIEEIEV DPPKSTEVRI KMIYASLCGT DVLCCNGFPK PLFPRIPGHE GVGAIESVGE SVKDLKEGDI VMPHFLGECG
101: DCPNCKSKRS NLCHKYPLNF SGLLLDGTSR MSINGQKIYH HVSCSTLSEY IVLDENYVIK VDPRLPIEHV PFLCCAFTTG FGATWKDVNI EKGSTVAVLG
201: LGGVGLGVVE GARQKEAAKI IGMDIHEMKI EKAKIYGITD FINISEKSIS ELIKDATGGL GVDYFFECTD VPQLTINEAI QSTRMGYGTV IVLGAGLVLD
301: WQMSYVPLMF GRTLKGSIYG GIRTHTDLPS IIDKCISKEI KLDELLTHEV SFNDVNKAFE YLKEPNCVKV LIKF

Best Arabidopsis Sequence Match ( AT1G22430.2 )
(BLAST)

001: MDKTFFSSNE GKPITCKAAI CRKAGEALVI EDIHVDPPQA YEVRIKILCT SLCHTDLTFW KLSFGPISRF PRILGHEAVG VVESIGENVD GFKQGDVVLP
101: VFHPYCEECK DCKSSKTNWC DRYAEDFISN TRRYGMASRF KDSSGEVIHH FLFVSSFSEY TVVDIAHLVK ISPEIPVDKA ALLSCGVSTG IGAAWKVANV
201: EEGSTIAIFG LGAVGLAVAE GARLRGAAKI IGIDTNSDKF ELGKKFGFTD FINPTLCGEK KISEVIKEMT EGGVDYSFEC VGLASLLNEA FISTRTGTGK
301: TVMLGMEKHA APISLGSFDL LRGRVICGSL FGGLKSKLDI PILVDHYLKK ELNLDSFITH ELNFKEINKA FALLEEGKSL RCILWMDK

Arabidopsis Description

Alcohol dehydrogenase-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SK86]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.