Factsheet for PGSC0003DMT400031884

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g083280.2.1	Tomato	cytosol	94.74	94.49
VIT_02s0025g02730.t01	Wine grape	cytosol	75.79	73.1
KRH75885	Soybean	cytosol	72.89	69.6
CDY59757	Canola	cytosol	68.68	68.68
AT1G64710.1	Thale cress	cytosol	68.42	68.42
Bra031208.1-P	Field mustard	cytosol	68.42	68.06
CDY13798	Canola	cytosol	68.42	68.06
KRH00223	Soybean	cytosol, nucleus	71.05	68.01
TraesCS1B01G066400.1	Wheat	cytosol	69.47	67.01
KRH75889	Soybean	cytosol	70.0	66.5
TraesCS1D01G052200.1	Wheat	cytosol	68.95	66.5
KRH75888	Soybean	cytosol	23.95	66.42
TraesCS1A01G050100.2	Wheat	cytosol	68.68	66.24
Os10t0159800-01	Rice	cytosol	70.0	66.0
Bra023290.1-P	Field mustard	cytosol	68.42	65.99
CDX93818	Canola	cytosol	68.16	65.74
CDY01241	Canola	cytosol	67.89	65.48
KRH49366	Soybean	cytosol, nucleus	68.16	64.75
AT1G32780.1	Thale cress	cytosol	66.84	64.47
EER91716	Sorghum	cytosol	66.84	63.5
EER91718	Sorghum	cytosol	65.79	63.45
GSMUA_Achr4P29520_001	Banana	cytosol	66.05	62.91
KRH65755	Soybean	cytosol	36.32	61.88
CDY26918	Canola	cytosol	40.79	61.26
Bra010185.1-P	Field mustard	cytosol	40.79	61.26
Zm00001d030347_P001	Maize	vacuole	66.58	60.53
KRH65753	Soybean	cytosol	31.05	60.51
KRH65756	Soybean	cytosol	25.79	56.65
Zm00001d030348_P001	Maize	cytosol	62.89	56.1
PGSC0003DMT400063937	Potato	cytosol	51.58	51.72
KRH75887	Soybean	cytosol	26.58	51.53
PGSC0003DMT400079071	Potato	cytosol	50.79	50.79
PGSC0003DMT400019942	Potato	cytosol	50.26	50.4
PGSC0003DMT400079175	Potato	cytosol	50.26	49.35
PGSC0003DMT400025617	Potato	cytosol	48.95	47.94
PGSC0003DMT400075618	Potato	cytosol	48.95	47.81
CDX73269	Canola	cytosol	47.63	43.83
PGSC0003DMT400038525	Potato	cytosol	42.89	43.24
PGSC0003DMT400038529	Potato	cytosol	36.05	42.81
KRG88472	Soybean	cytosol	16.84	42.67
PGSC0003DMT400038526	Potato	cytosol	33.95	42.43
PGSC0003DMT400047760	Potato	cytosol	39.74	40.37
PGSC0003DMT400059936	Potato	plastid	28.16	24.77
PGSC0003DMT400081907	Potato	cytosol	21.32	23.41
PGSC0003DMT400065063	Potato	cytosol	21.84	23.38

Protein Annotations

EntrezGene:102585018	Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:35.1	InterPro:ADH_C	InterPro:ADH_N
InterPro:ADH_Zn_CS	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0008270	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	InterPro:GroES-like_sf	UniProt:M1AWF1
InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF08240	EnsemblPlantsGene:PGSC0003DMG400012228	PGSC:PGSC0003DMG400012228	EnsemblPlants:PGSC0003DMT400031884
ScanProsite:PS00059	PANTHER:PTHR43880	PANTHER:PTHR43880:SF18	SUPFAM:SSF50129	SUPFAM:SSF51735	UniParc:UPI000295B33E
RefSeq:XP_006343769.1	SEG:seg	:	:	:	:

Description

Alcohol dehydrogenase [Source:PGSC_GENE;Acc:PGSC0003DMG400012228]

Coordinates

chr8:+:56752362..56755457

Molecular Weight (calculated)

41507.5 Da

IEP (calculated)

7.084

GRAVY (calculated)

0.009

Length

380 amino acids

Sequence
(BLAST)

001: MASKGKVITC RAAVAYGPGQ PLVVEQVQVD PPQKMEVRIK ILFTSICHTD LSAWKGESEA QRAYPRILGH EASGVVESVG EGVIDMKEGD HVVPIFNGEC
101: GDCIYCKSSK KTNLCGKFRV NPFKSVMDSD GKCRFRNKDG IPIYHFLNTS TFSDYTVVDY ACLVKIDPHA PLDKMTLLSC GVSTGLGAAW NTADVQTGET
201: VAVFGLGAVG LAVVEGARTR GASKIIGVDI NPEKRIKGEA IGITDFINPK EIDVPVHEKI REMTEGGVHY SFECAGNMEV LREAFLCTHD GWGMAIVLGI
301: HPTPRLLSLH PMELFDGRRI VASVFGDFKG KSQLPLFAKQ CMAGVVKLDE FITHRLPFEK INEAIQLLLD GKSLRCLLHL

Best Arabidopsis Sequence Match ( AT1G64710.1 )
(BLAST)

001: METQGKVITC KAAVAWGAGE PLVMEDVKVD PPQRLEVRIR ILFTSICHTD LSAWKGENEA QRAYPRILGH EAAGIVESVG EGVEEMMAGD HVLPIFTGEC
101: GDCRVCKRDG ANLCERFRVD PMKKVMVTDG KTRFFTSKDN KPIYHFLNTS TFSEYTVIDS ACVLKVDPLF PLEKISLLSC GVSTGVGAAW NVADIQPAST
201: VAIFGLGAVG LAVAEGARAR GASKIIGIDI NPDKFQLGRE AGISEFINPK ESDKAVHERV MEITEGGVEY SFECAGSIEA LREAFLSTNS GVGVTVMLGV
301: HASPQLLPIH PMELFQGRSI TASVFGGFKP KTQLPFFITQ CLQGLLNLDL FISHQLPFHD INEAMQLLHQ GKALRCLLHL

Arabidopsis Description

Alcohol dehydrogenase-like 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZ49]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.