CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra010185.1-P	Field mustard	cytosol	58.35	95.26
CDY26918	Canola	cytosol	58.35	95.26
CDX93818	Canola	cytosol	65.38	68.53
CDY01241	Canola	cytosol	64.89	68.02
AT1G32780.1	Thale cress	cytosol	62.95	65.99
KRH65755	Soybean	cytosol	27.84	51.57
KRH00223	Soybean	cytosol, nucleus	47.94	49.87
VIT_02s0025g02730.t01	Wine grape	cytosol	47.46	49.75
KRH65756	Soybean	cytosol	20.82	49.71
TraesCS1A01G050100.2	Wheat	cytosol	47.22	49.49
TraesCS1D01G052200.1	Wheat	cytosol	47.22	49.49
TraesCS1B01G066400.1	Wheat	cytosol	46.73	48.98
KRH49366	Soybean	cytosol, nucleus	47.22	48.75
CDY59757	Canola	cytosol	44.79	48.68
CDY13798	Canola	cytosol	44.79	48.43
KRH75885	Soybean	cytosol	46.25	47.99
Solyc08g083280.2.1	Tomato	cytosol	44.07	47.77
PGSC0003DMT400031884	Potato	cytosol	43.83	47.63
KRH75889	Soybean	cytosol	46.0	47.5
Os10t0159800-01	Rice	cytosol	46.0	47.15
GSMUA_Achr4P29520_001	Banana	cytosol	45.28	46.87
EER91716	Sorghum	cytosol	45.28	46.75
EER91718	Sorghum	cytosol	44.55	46.7
CDY71245	Canola	cytosol	28.57	46.64
Zm00001d030347_P001	Maize	vacuole	44.31	43.78
CDY22323	Canola	cytosol	37.29	40.63
CDX94738	Canola	cytosol	37.29	40.63
Zm00001d030348_P001	Maize	cytosol	41.65	40.38
CDY13136	Canola	cytosol	37.05	40.37
CDY36960	Canola	cytosol	37.05	40.37
CDX87542	Canola	cytosol	35.59	38.79
CDY21362	Canola	cytosol	36.56	38.72
CDY04816	Canola	cytosol	36.56	38.72
CDX88342	Canola	cytosol	35.35	38.52
CDY41481	Canola	cytosol	36.08	38.21
CDX68065	Canola	cytosol	34.87	37.99
CDX79188	Canola	cytosol	34.62	37.73
CDX91678	Canola	cytosol	35.59	37.69
CDY39423	Canola	cytosol	34.87	37.02
CDY64947	Canola	cytosol	34.62	36.76
KRG88472	Soybean	cytosol	13.32	36.67
CDX82904	Canola	cytosol	34.38	36.5
CDY00452	Canola	cytosol	34.38	36.41
CDY05455	Canola	cytosol	32.45	35.26
CDY05399	Canola	cytosol	32.45	35.26
CDX79124	Canola	cytosol	30.51	34.71
KRH75887	Soybean	cytosol	16.46	34.69
CDY38887	Canola	cytosol	4.6	33.33
KRH65753	Soybean	cytosol	14.53	30.77
CDX97482	Canola	cytosol	14.29	27.44
CDY32607	Canola	cytosol	9.44	24.22
CDY30977	Canola	cytosol	16.46	23.45
KRH75888	Soybean	cytosol	7.02	21.17
CDX86557	Canola	cytosol, extracellular	5.08	20.79
CDX86558	Canola	mitochondrion	7.02	20.71
CDX89070	Canola	cytosol	11.38	20.61
CDY41524	Canola	mitochondrion	20.82	19.77
CDX84427	Canola	mitochondrion	20.58	19.54
CDY00508	Canola	cytosol	16.22	19.36
CDY58156	Canola	cytosol	16.46	18.68
CDX86559	Canola	extracellular	2.91	16.22
CDX81190	Canola	cytosol	3.39	12.28
CDX73268	Canola	cytosol	0.97	8.89

Protein Annotations

EnsemblPlants:CDX73269	EnsemblPlantsGene:GSBRNA2T00106317001	Gene3D:3.40.50.720	Gene3D:3.90.180.10	GO:A0A078CAP0	GO:GO:0008150
GO:GO:0008152	GO:GO:0055114	InterPro:ADH_C	InterPro:ADH_N	InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf
PANTHER:PTHR43880	PANTHER:PTHR43880:SF18	PFAM:PF00107	PFAM:PF08240	ProteinID:CDX73269	ProteinID:CDX73269.1
SEG:seg	SUPFAM:SSF50129	SUPFAM:SSF51735	UniParc:UPI0004EE5971	MapMan:35.1	:

Description

BnaC05g28370D

Coordinates

chrLK031798:-:450939..458671

Molecular Weight (calculated)

45515.0 Da

IEP (calculated)

9.618

GRAVY (calculated)

-0.207

Length

413 amino acids

Sequence
(BLAST)

001: MAETQGKVIT CKAAVVWGPK EPLVIQEICV DPPQKMEVRV KILYSSICHT DLGAWTGVNE GERAFPRILY NRIVESVGGV KDVKEGDYVI PTFNGECGEC
101: RVCTNGVSNL CERYKVDPMK RLMVNDGGTR FSTTTNKDGG SSQKQRVYHF LNTSTFTEYT VLDSACVVKI DPNAPLKQMS LLSCGVSTDN PKLSSSSSRP
201: PLPALSPSSL PQSLRGSLIR SITVSLILHL LDEDVLLGLI NLLVRPLRHK SLIVQAAWTR RSRGEAAKRP NRESWKQRTD THMRPFLLNV FFYRKFIHAK
301: VGVGAAWNTA NVKEGTTTAV FGLGSVGLAV AEGARARGVS RIIGVDANAS KFEKGKLGIT DFVNPKDLTK PVHERIRELM SGGVDYSFEC TGNVDVLREP
401: FYPLKQVGDR RCL

Best Arabidopsis Sequence Match ( AT1G32780.1 )
(BLAST)

001: MAETQGKVIT CKAAVVWGPK VPLVIQEICV DPPQKMEVRV KILYSSICHT DLGCWNGTNE AERAFPRILG HEAVGIVESV GEGVKDVKEG DYVIPTFNGE
101: CGECKVCKRE ESNLCERYHV DPMKRVMVND GGTRFSTTIN KDGGSSQSQP IYHFLNTSTF TEYTVLDSAC VVKIDPNSPL KQMSLLSCGV STGVGAAWNI
201: ANVKEGKSTA VFGLGSVGLA VAEGARARGA SRIIGVDANA SKFEKGKLMG VTDFINPKDL TKPVHQMIRE ITGGGVDYSF ECTGNVDVLR EAFLSTHVGW
301: GSTVLVGIYP TPRTLPLHPM ELFDGRRITG SVFGGFKPKS QLPNFAQQCM KGVVKLEPFI TNELPFEKIN DAFQLLRDGK SLRCILQISK LLKR

Arabidopsis Description

Alcohol dehydrogenase-like 3 [Source:UniProtKB/Swiss-Prot;Acc:A1L4Y2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.