CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY38887	Canola	cytosol	34.16	96.49
CDX86558	Canola	mitochondrion	63.98	73.57
CDY00508	Canola	cytosol	80.12	37.28
CDY58156	Canola	cytosol	80.12	35.44
CDX89070	Canola	cytosol	20.5	14.47
CDX97482	Canola	cytosol	18.01	13.49
CDY30977	Canola	cytosol	24.22	13.45
CDY26918	Canola	cytosol	19.88	12.65
CDY71245	Canola	cytosol	16.77	10.67
CDY41524	Canola	mitochondrion	28.57	10.57
CDX84427	Canola	mitochondrion	28.57	10.57
CDY64947	Canola	cytosol	22.98	9.51
CDY39423	Canola	cytosol	22.98	9.51
CDY36960	Canola	cytosol	22.36	9.5
CDY22323	Canola	cytosol	22.36	9.5
CDY13136	Canola	cytosol	22.36	9.5
CDY41481	Canola	cytosol	22.98	9.49
CDX73269	Canola	cytosol	24.22	9.44
CDX68065	Canola	cytosol	21.74	9.23
CDX94738	Canola	cytosol	21.74	9.23
CDY04816	Canola	cytosol	22.36	9.23
CDY21362	Canola	cytosol	22.36	9.23
CDY01241	Canola	cytosol	22.36	9.14
CDX93818	Canola	cytosol	22.36	9.14
CDX87542	Canola	cytosol	21.12	8.97
CDX88342	Canola	cytosol	21.12	8.97
CDX79188	Canola	cytosol	21.12	8.97
CDY00452	Canola	cytosol	21.12	8.72
CDX91678	Canola	cytosol	21.12	8.72
CDX79124	Canola	cytosol	19.25	8.54
CDY59757	Canola	cytosol	19.88	8.42
CDY13798	Canola	cytosol	19.88	8.38
CDY05455	Canola	cytosol	19.25	8.16
CDY05399	Canola	cytosol	19.25	8.16
CDX82904	Canola	cytosol	19.25	7.97
CDX86557	Canola	cytosol, extracellular	3.73	5.94
CDX86559	Canola	extracellular	2.48	5.41
CDX81190	Canola	cytosol	3.11	4.39
CDX73268	Canola	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:CDY32607	EnsemblPlantsGene:GSBRNA2T00052632001	Gene3D:3.40.50.720	Gene3D:3.90.180.10	GO:A0A078H587	InterPro:GroES-like_sf
InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR43161	PANTHER:PTHR43161:SF8	ProteinID:CDY32607	ProteinID:CDY32607.1	SUPFAM:SSF50129
SUPFAM:SSF51735	UniParc:UPI0004EE73B8	UniProt:A0A078H587	MapMan:3.5.2	:	:

Description

BnaC03g15750DBnaC03g15750D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H587]

Coordinates

chrLK032297:-:201187..201737

Molecular Weight (calculated)

17311.2 Da

IEP (calculated)

6.919

GRAVY (calculated)

0.237

Length

161 amino acids

Sequence
(BLAST)

001: MKRMLGKSAA NESTDVVGDR VALEPGRYNL CPEMKFFATP PVHGSLANQV VHPADLCFKL SENVSLEEGA MCEPLSVGVH ACRRAEVGPE TNVLVMGAGP
101: IGLVTMLAAR AFGVPRIVIV DVDDNRLTVA KQHVAYGIVK VTTSLKVSTL SWIDQSFIMT M

Best Arabidopsis Sequence Match ( AT5G51970.1 )
(BLAST)

001: MGKGGMSQGE GSKVEEENMA AWLVGINTLK IQPFLLPSVG PHDVRVRMKA VGICGSDVHY LKTMRCADFV VKEPMVIGHE CAGIIEEVGE EVKHLVVGDR
101: VALEPGISCW RCNLCREGRY NLCPEMKFFA TPPVHGSLAN QVVHPADLCF KLPENVSLEE GAMCEPLSVG VHACRRAEVG PETNVLVMGA GPIGLVTMLA
201: ARAFSVPRIV IVDVDENRLA VAKQLGADEI VQVTTNLEDV GSEVEQIQKA MGSNIDVTFD CAGFNKTMST ALAATRCGGK VCLVGMGHGI MTVPLTPAAA
301: REVDVVGVFR YKNTWPLCLE FLTSGKIDVK PLITHRFGFS QKEVEDAFET SARGSNAIKV MFNL

Arabidopsis Description

SDHSorbitol dehydrogenase [Source:UniProtKB/Swiss-Prot;Acc:Q9FJ95]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.