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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 3
  • mitochondrion 3
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:plastid
iPSORT:plastid
MultiLoc:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY38887 Canola cytosol 38.57 94.74
CDY32607 Canola cytosol 73.57 63.98
CDY00508 Canola cytosol 78.57 31.79
CDY58156 Canola cytosol 77.86 29.95
CDX89070 Canola cytosol 25.0 15.35
CDY30977 Canola cytosol 20.0 9.66
CDY26918 Canola cytosol 15.71 8.7
CDY41524 Canola mitochondrion 26.43 8.51
CDX84427 Canola mitochondrion 26.43 8.51
CDX97482 Canola cytosol 12.86 8.37
CDY64947 Canola cytosol 21.43 7.71
CDY71245 Canola cytosol 13.57 7.51
CDY39423 Canola cytosol 20.71 7.46
CDY41481 Canola cytosol 20.71 7.44
CDX68065 Canola cytosol 20.0 7.39
CDY00452 Canola cytosol 20.0 7.18
CDY04816 Canola cytosol 20.0 7.18
CDY21362 Canola cytosol 20.0 7.18
CDY36960 Canola cytosol 19.29 7.12
CDY22323 Canola cytosol 19.29 7.12
CDX79188 Canola cytosol 19.29 7.12
CDY13136 Canola cytosol 19.29 7.12
CDY01241 Canola cytosol 20.0 7.11
CDX93818 Canola cytosol 20.0 7.11
CDX73269 Canola cytosol 20.71 7.02
CDX79124 Canola cytosol 17.86 6.89
CDX94738 Canola cytosol 18.57 6.86
CDX88342 Canola cytosol 18.57 6.86
CDX87542 Canola cytosol 18.57 6.86
CDY05455 Canola cytosol 18.57 6.84
CDY05399 Canola cytosol 18.57 6.84
CDX91678 Canola cytosol 18.57 6.67
CDX82904 Canola cytosol 17.86 6.43
CDY59757 Canola cytosol 17.14 6.32
CDY13798 Canola cytosol 17.14 6.28
CDX81190 Canola cytosol 5.0 6.14
CDX86557 Canola cytosol, extracellular 2.86 3.96
CDX86559 Canola extracellular 0.71 1.35
CDX73268 Canola cytosol 0.0 0.0
Protein Annotations
EnsemblPlants:CDX86558EnsemblPlantsGene:GSBRNA2T00145180001Gene3D:3.40.50.720Gene3D:3.90.180.10GO:A0A078DGX4InterPro:GroES-like_sf
InterPro:NAD(P)-bd_dom_sfPANTHER:PTHR43161PANTHER:PTHR43161:SF8ProteinID:CDX86558ProteinID:CDX86558.1SEG:seg
SUPFAM:SSF50129SUPFAM:SSF51735UniParc:UPI0004EF10FEMapMan:3.5.2::
Description
BnaC08g01450D
Coordinates
chrLK031846:-:607560..608075
Molecular Weight (calculated)
14905.3 Da
IEP (calculated)
5.644
GRAVY (calculated)
0.195
Length
140 amino acids
Sequence
(BLAST)
001: MQPLQGRKIP SLPCARTPPV HGSLANQVVH PADMCFKLPD NVSLEEGAMC EPLSVGVHAC RRAEVGPETN VLVMGDGPIG LVTMLAARAF GVPRIVIVVV
101: DVDDNRLSVS KQLGADGIVK VTTSLEDVGF EVEQIQKLKL
Best Arabidopsis Sequence Match ( AT5G51970.1 )
(BLAST)
001: MGKGGMSQGE GSKVEEENMA AWLVGINTLK IQPFLLPSVG PHDVRVRMKA VGICGSDVHY LKTMRCADFV VKEPMVIGHE CAGIIEEVGE EVKHLVVGDR
101: VALEPGISCW RCNLCREGRY NLCPEMKFFA TPPVHGSLAN QVVHPADLCF KLPENVSLEE GAMCEPLSVG VHACRRAEVG PETNVLVMGA GPIGLVTMLA
201: ARAFSVPRIV IVDVDENRLA VAKQLGADEI VQVTTNLEDV GSEVEQIQKA MGSNIDVTFD CAGFNKTMST ALAATRCGGK VCLVGMGHGI MTVPLTPAAA
301: REVDVVGVFR YKNTWPLCLE FLTSGKIDVK PLITHRFGFS QKEVEDAFET SARGSNAIKV MFNL
Arabidopsis Description
SDHSorbitol dehydrogenase [Source:UniProtKB/Swiss-Prot;Acc:Q9FJ95]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.