Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G24760.1 | CDY05399 | AT5G24760.1 | 21798944 |
| AT5G24760.1 | CDY05455 | AT5G24760.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY05455 | Canola | cytosol | 98.68 | 98.68 |
| AT5G24760.1 | Thale cress | cytosol | 92.89 | 92.65 |
| KRH38840 | Soybean | cytosol | 77.89 | 79.14 |
| KRH08072 | Soybean | cytosol | 65.26 | 76.54 |
| VIT_16s0039g00320.t01 | Wine grape | cytosol | 75.0 | 75.2 |
| Os02t0637700-01 | Rice | plastid | 72.89 | 72.7 |
| TraesCS6A01G234500.2 | Wheat | cytosol | 73.16 | 72.4 |
| TraesCS6B01G263200.1 | Wheat | cytosol | 72.89 | 72.14 |
| TraesCS6D01G217000.3 | Wheat | cytosol | 73.42 | 72.09 |
| EES07202 | Sorghum | cytosol | 71.84 | 71.09 |
| Solyc06g072160.2.1 | Tomato | cytosol | 73.42 | 70.81 |
| GSMUA_Achr4P25400_001 | Banana | cytosol, endoplasmic reticulum | 70.53 | 70.34 |
| Zm00001d051227_P001 | Maize | extracellular | 70.79 | 70.05 |
| KRH62448 | Soybean | cytosol, vacuole | 27.89 | 69.74 |
| CDX79188 | Canola | cytosol | 52.37 | 52.51 |
| CDX87542 | Canola | cytosol | 52.11 | 52.24 |
| CDX88342 | Canola | cytosol | 51.84 | 51.98 |
| CDX68065 | Canola | cytosol | 51.32 | 51.45 |
| CDX94738 | Canola | cytosol | 51.05 | 51.19 |
| CDY22323 | Canola | cytosol | 51.05 | 51.19 |
| CDY13136 | Canola | cytosol | 50.79 | 50.92 |
| CDY36960 | Canola | cytosol | 50.53 | 50.66 |
| CDY64947 | Canola | cytosol | 49.21 | 48.07 |
| CDY39423 | Canola | cytosol | 49.21 | 48.07 |
| CDX91678 | Canola | cytosol | 48.95 | 47.69 |
| CDY41481 | Canola | cytosol | 48.68 | 47.44 |
| CDY21362 | Canola | cytosol | 48.42 | 47.18 |
| CDY59757 | Canola | cytosol | 47.11 | 47.11 |
| CDX82904 | Canola | cytosol | 48.16 | 47.04 |
| CDY71245 | Canola | cytosol | 31.05 | 46.64 |
| CDY13798 | Canola | cytosol | 46.84 | 46.6 |
| CDY04816 | Canola | cytosol | 47.63 | 46.41 |
| CDY26918 | Canola | cytosol | 30.79 | 46.25 |
| CDY00452 | Canola | cytosol | 47.11 | 45.9 |
| CDX79124 | Canola | cytosol | 43.68 | 45.73 |
| CDX93818 | Canola | cytosol | 46.32 | 44.67 |
| CDY01241 | Canola | cytosol | 46.05 | 44.42 |
| CDX73268 | Canola | cytosol | 4.21 | 35.56 |
| CDX73269 | Canola | cytosol | 35.26 | 32.45 |
| CDX89070 | Canola | cytosol | 16.05 | 26.75 |
| CDX97482 | Canola | cytosol | 14.74 | 26.05 |
| CDX86557 | Canola | cytosol, extracellular | 6.58 | 24.75 |
| CDY38887 | Canola | cytosol | 3.68 | 24.56 |
| CDY30977 | Canola | cytosol | 18.16 | 23.79 |
| CDY00508 | Canola | cytosol | 21.32 | 23.41 |
| CDY58156 | Canola | cytosol | 22.11 | 23.08 |
| CDY41524 | Canola | mitochondrion | 26.32 | 22.99 |
| CDX84427 | Canola | mitochondrion | 26.32 | 22.99 |
| CDX81190 | Canola | cytosol | 6.58 | 21.93 |
| CDY32607 | Canola | cytosol | 8.16 | 19.25 |
| CDX86558 | Canola | mitochondrion | 6.84 | 18.57 |
| CDX86559 | Canola | extracellular | 3.16 | 16.22 |
Protein Annotations
| Gene3D:3.40.50.720 | Gene3D:3.90.180.10 | MapMan:35.1 | GO:A0A078EXT6 | InterPro:ADH_C | InterPro:ADH_N |
| InterPro:ADH_Zn_CS | EnsemblPlants:CDY05399 | ProteinID:CDY05399 | ProteinID:CDY05399.1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 | GO:GO:0016491 | GO:GO:0055114 |
| EnsemblPlantsGene:GSBRNA2T00120293001 | InterPro:GroES-like_sf | InterPro:NAD(P)-bd_dom_sf | PFAM:PF00107 | PFAM:PF08240 | ScanProsite:PS00059 |
| PANTHER:PTHR43880 | PANTHER:PTHR43880:SF5 | SUPFAM:SSF50129 | SUPFAM:SSF51735 | UniParc:UPI0004EDCDDC | SEG:seg |
Description
BnaC02g41070D
Coordinates
chrLK031961:+:952597..954866
Molecular Weight (calculated)
40823.4 Da
IEP (calculated)
6.813
GRAVY (calculated)
0.073
Length
380 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLSSSHEQP QVITCKAAVT WRAGEPLVME EVEVSPPQPL EIRIKVVCTS LCRSDLSAWE SQSLLPRIFG HEAAGIVESI GEGVTEFEKG DHVLAVFTGE
101: CGSCRHCISG KSNMCQVLGM ERRGLMHSDQ KTRFSIKGKP VYHYCAVSSF SEYTVVHSGC AVKVHPLAPL HKICLLSCGA AAGLGAAWNV ADVQRGSSVV
201: IFGLGTVGLS VAQGAKLRGA AQIIGVDINS SKAEQAKIFG VTDFINSNDI SEPIHQVIKR MTGGGADFSF ECVGDTGVAT TALQSCSDGW GMTVTLGVPK
301: VKPEVSAHYG LFLSGKSLKG TLFGGWKPKS DLPSLIEKYM NKEIMIDELV THDLVFDDIN EAFELMREGK CLRCVLHMSK
101: CGSCRHCISG KSNMCQVLGM ERRGLMHSDQ KTRFSIKGKP VYHYCAVSSF SEYTVVHSGC AVKVHPLAPL HKICLLSCGA AAGLGAAWNV ADVQRGSSVV
201: IFGLGTVGLS VAQGAKLRGA AQIIGVDINS SKAEQAKIFG VTDFINSNDI SEPIHQVIKR MTGGGADFSF ECVGDTGVAT TALQSCSDGW GMTVTLGVPK
301: VKPEVSAHYG LFLSGKSLKG TLFGGWKPKS DLPSLIEKYM NKEIMIDELV THDLVFDDIN EAFELMREGK CLRCVLHMSK
001: MSASSSSFEQ PQVITCNAAV AWRAGEPLVM EEVEVSPPQP LEIRIKVVCT SLCRSDLSAW ESQSLLPRIF GHEAAGIVES IGEGVTEFEK GDHVLAVFTG
101: ECGSCRHCIS GKSNMCQVLG MERKGLMHSD QKTRFSIKGK PVYHYCAVSS FSEYTVVHSG CAVKVDPLAP LHKICLLSCG VAAGLGAAWN VADVQKGSSV
201: VIFGLGTVGL SVAQGAKLRG AAQILGVDIN PAKAEQAKTF GVTDFINSND LSEPIPQVIK RMTGGGADFS FECVGDTGIA TTALQSCSDG WGMTVTLGVP
301: KAKPEVSAHY GLFLSGKSLK GTLFGGWKPK SDLPSLIDKY MNKEIMIDEF ITHNLSFDEI NKAFVLMREG KCLRCVLHMP K
101: ECGSCRHCIS GKSNMCQVLG MERKGLMHSD QKTRFSIKGK PVYHYCAVSS FSEYTVVHSG CAVKVDPLAP LHKICLLSCG VAAGLGAAWN VADVQKGSSV
201: VIFGLGTVGL SVAQGAKLRG AAQILGVDIN PAKAEQAKTF GVTDFINSND LSEPIPQVIK RMTGGGADFS FECVGDTGIA TTALQSCSDG WGMTVTLGVP
301: KAKPEVSAHY GLFLSGKSLK GTLFGGWKPK SDLPSLIDKY MNKEIMIDEF ITHNLSFDEI NKAFVLMREG KCLRCVLHMP K
Arabidopsis Description
Alcohol dehydrogenase-like 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8LEB2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.