Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 5
- plastid 1
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
Ath locusA | locusB | Ath locusB | Paper |
---|---|---|---|
AT5G24760.1 | KRH08072 | AT5G24760.1 | 21798944 |
AT5G24760.1 | KRH38840 | AT5G24760.1 | 21798944 |
AT5G24760.1 | KRH62448 | AT5G24760.1 | 21798944 |
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRH08072 | Soybean | cytosol | 82.35 | 95.06 |
KRH62448 | Soybean | cytosol, vacuole | 32.09 | 78.95 |
AT5G24760.1 | Thale cress | cytosol | 79.95 | 78.48 |
CDY05399 | Canola | cytosol | 79.14 | 77.89 |
Bra020469.1-P | Field mustard | cytosol | 78.88 | 77.63 |
VIT_16s0039g00320.t01 | Wine grape | cytosol | 78.61 | 77.57 |
CDY05455 | Canola | cytosol | 78.61 | 77.37 |
Os02t0637700-01 | Rice | plastid | 77.01 | 75.59 |
GSMUA_Achr4P25400_001 | Banana | cytosol, endoplasmic reticulum | 74.87 | 73.49 |
TraesCS6A01G234500.2 | Wheat | cytosol | 75.13 | 73.18 |
TraesCS6D01G217000.3 | Wheat | cytosol | 75.4 | 72.87 |
Solyc06g072160.2.1 | Tomato | cytosol | 76.74 | 72.84 |
TraesCS6B01G263200.1 | Wheat | cytosol | 74.6 | 72.66 |
EES07202 | Sorghum | cytosol | 73.53 | 71.61 |
Zm00001d051227_P001 | Maize | extracellular | 72.73 | 70.83 |
KRH64058 | Soybean | cytosol, endoplasmic reticulum | 53.74 | 52.76 |
KRH64550 | Soybean | endoplasmic reticulum | 52.41 | 51.58 |
KRH53384 | Soybean | cytosol, endoplasmic reticulum, mitochondrion | 52.41 | 51.44 |
KRH32257 | Soybean | cytosol | 52.14 | 51.32 |
KRG95774 | Soybean | cytosol, nucleus | 51.07 | 50.4 |
KRH67486 | Soybean | nucleus | 51.07 | 50.4 |
KRH15944 | Soybean | endoplasmic reticulum | 50.8 | 50.0 |
KRH16454 | Soybean | cytosol | 48.4 | 48.79 |
KRH18052 | Soybean | cytosol | 49.2 | 48.55 |
KRG89834 | Soybean | cytosol | 50.27 | 47.96 |
KRH73443 | Soybean | cytosol | 48.66 | 47.15 |
KRH14690 | Soybean | cytosol | 48.66 | 47.03 |
KRH73446 | Soybean | cytosol | 46.79 | 45.22 |
KRH49366 | Soybean | cytosol, nucleus | 48.13 | 45.0 |
KRH00223 | Soybean | cytosol, nucleus | 47.59 | 44.84 |
KRH75885 | Soybean | cytosol | 47.59 | 44.72 |
KRH75889 | Soybean | cytosol | 46.52 | 43.5 |
KRH65755 | Soybean | cytosol | 25.67 | 43.05 |
KRH14696 | Soybean | cytosol | 14.97 | 42.42 |
KRH23988 | Soybean | endoplasmic reticulum, extracellular | 10.16 | 42.22 |
KRH14698 | Soybean | cytosol | 8.82 | 41.77 |
KRH14692 | Soybean | cytosol | 8.82 | 41.77 |
KRH19643 | Soybean | cytosol | 12.83 | 41.74 |
KRH23997 | Soybean | cytosol | 38.24 | 39.5 |
KRH23989 | Soybean | cytosol | 39.3 | 39.2 |
KRH23996 | Soybean | cytosol | 39.3 | 39.2 |
KRH75887 | Soybean | cytosol | 20.32 | 38.78 |
KRH65756 | Soybean | cytosol | 17.91 | 38.73 |
KRH23995 | Soybean | nucleus | 38.24 | 38.03 |
KRH65753 | Soybean | cytosol | 19.79 | 37.95 |
KRH75888 | Soybean | cytosol | 13.64 | 37.23 |
KRG88472 | Soybean | cytosol | 13.9 | 34.67 |
KRH59676 | Soybean | mitochondrion | 27.54 | 24.18 |
KRH41009 | Soybean | mitochondrion, plastid | 27.54 | 24.12 |
KRH09146 | Soybean | cytosol, nucleus | 20.86 | 21.43 |
KRH38627 | Soybean | cytosol | 21.12 | 17.14 |
Protein Annotations
EntrezGene:100819938 | Gene3D:3.40.50.720 | Gene3D:3.90.180.10 | MapMan:35.1 | EMBL:ACUP02005882 | InterPro:ADH_C |
InterPro:ADH_N | InterPro:ADH_Zn_CS | EnsemblPlantsGene:GLYMA_09G161600 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 | GO:GO:0016491 | GO:GO:0046872 | GO:GO:0055114 |
InterPro:GroES-like_sf | UniProt:I1L3S5 | EnsemblPlants:KRH38840 | ProteinID:KRH38840 | ProteinID:KRH38840.1 | InterPro:NAD(P)-bd_dom_sf |
PFAM:PF00107 | PFAM:PF08240 | ScanProsite:PS00059 | PANTHER:PTHR43880 | PANTHER:PTHR43880:SF5 | SUPFAM:SSF50129 |
SUPFAM:SSF51735 | UniParc:UPI0002338A4A | : | : | : | : |
Description
hypothetical protein
Coordinates
chr9:+:38584603..38589387
Molecular Weight (calculated)
40360.8 Da
IEP (calculated)
7.138
GRAVY (calculated)
0.028
Length
374 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSPQVITCK AAVAWRAGEA LVMEEVEVSP PQPMEIRIKV VSTSLCRSDL SAWESHAIFP RIFGHEASGI VESVGQGVTE FKEGDHVLTV FIGECMSCRQ
101: CTSGKSNTCQ ILGLERRGLM HSDQKTRFSL KGKPVYHYCA VSSFSEYTVV HSGCAVKVSP LAPLEKICLL SCGVAAGLGA AWNVADVSKG STVVIFGLGT
201: VGLSVAQASK LRGASRIIGV DNNPQKCENA KAFGVTEVVD PNSYKEPIAQ VIKRITDGGA DFSFECVGDT DTITTALQSC CDGWGLTVTL GVPKVKPEMS
301: AHYGLLLMGR TLKGSLFGGW KPKSDLPSLV EKYLNKEIQI DDYITHNLSF DDINKAFNLM KEGECLRCVI HMPR
101: CTSGKSNTCQ ILGLERRGLM HSDQKTRFSL KGKPVYHYCA VSSFSEYTVV HSGCAVKVSP LAPLEKICLL SCGVAAGLGA AWNVADVSKG STVVIFGLGT
201: VGLSVAQASK LRGASRIIGV DNNPQKCENA KAFGVTEVVD PNSYKEPIAQ VIKRITDGGA DFSFECVGDT DTITTALQSC CDGWGLTVTL GVPKVKPEMS
301: AHYGLLLMGR TLKGSLFGGW KPKSDLPSLV EKYLNKEIQI DDYITHNLSF DDINKAFNLM KEGECLRCVI HMPR
001: MSASSSSFEQ PQVITCNAAV AWRAGEPLVM EEVEVSPPQP LEIRIKVVCT SLCRSDLSAW ESQSLLPRIF GHEAAGIVES IGEGVTEFEK GDHVLAVFTG
101: ECGSCRHCIS GKSNMCQVLG MERKGLMHSD QKTRFSIKGK PVYHYCAVSS FSEYTVVHSG CAVKVDPLAP LHKICLLSCG VAAGLGAAWN VADVQKGSSV
201: VIFGLGTVGL SVAQGAKLRG AAQILGVDIN PAKAEQAKTF GVTDFINSND LSEPIPQVIK RMTGGGADFS FECVGDTGIA TTALQSCSDG WGMTVTLGVP
301: KAKPEVSAHY GLFLSGKSLK GTLFGGWKPK SDLPSLIDKY MNKEIMIDEF ITHNLSFDEI NKAFVLMREG KCLRCVLHMP K
101: ECGSCRHCIS GKSNMCQVLG MERKGLMHSD QKTRFSIKGK PVYHYCAVSS FSEYTVVHSG CAVKVDPLAP LHKICLLSCG VAAGLGAAWN VADVQKGSSV
201: VIFGLGTVGL SVAQGAKLRG AAQILGVDIN PAKAEQAKTF GVTDFINSND LSEPIPQVIK RMTGGGADFS FECVGDTGIA TTALQSCSDG WGMTVTLGVP
301: KAKPEVSAHY GLFLSGKSLK GTLFGGWKPK SDLPSLIDKY MNKEIMIDEF ITHNLSFDEI NKAFVLMREG KCLRCVLHMP K
Arabidopsis Description
Alcohol dehydrogenase-like 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8LEB2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.