CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
mitochondrion 1
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400019942	Potato	cytosol	90.53	90.77
KRH19643	Soybean	cytosol	27.11	89.57
KRG95774	Soybean	cytosol, nucleus	88.95	89.18
KRH67486	Soybean	nucleus	88.68	88.92
VIT_07s0005g04600.t01	Wine grape	cytosol	55.0	88.56
VIT_07s0005g04610.t01	Wine grape	cytosol	28.16	88.43
GSMUA_Achr1P05790_001	Banana	cytosol, plasma membrane	88.16	88.39
Os02t0815500-01	Rice	plasma membrane, plastid	88.16	87.93
CDY13136	Canola	cytosol	87.63	87.86
CDY36960	Canola	cytosol	87.37	87.6
CDY22323	Canola	cytosol	87.37	87.6
CDX94738	Canola	cytosol	87.37	87.6
Bra033706.1-P	Field mustard	cytosol	87.37	87.6
EES06008	Sorghum	cytosol	87.37	87.14
Solyc09g064370.2.1	Tomato	nucleus	86.84	86.39
TraesCS6B01G425700.1	Wheat	cytosol	86.58	86.35
TraesCS6D01G371200.1	Wheat	golgi	86.32	86.09
TraesCS6A01G386600.1	Wheat	cytosol	86.05	85.83
AT5G43940.2	Thale cress	cytosol	87.63	85.17
Bra027516.1-P	Field mustard	extracellular	87.11	81.53
HORVU6Hr1G090260.1	Barley	cytosol	86.58	65.54
KRH15944	Soybean	endoplasmic reticulum	58.16	58.16
KRH64058	Soybean	cytosol, endoplasmic reticulum	57.89	57.74
KRH18052	Soybean	cytosol	57.11	57.26
KRH16454	Soybean	cytosol	55.53	56.87
KRH64550	Soybean	endoplasmic reticulum	56.58	56.58
KRH53384	Soybean	cytosol, endoplasmic reticulum, mitochondrion	56.58	56.43
Zm00001d018468_P001	Maize	plastid	77.37	56.43
KRH08072	Soybean	cytosol	45.53	53.4
KRH38840	Soybean	cytosol	51.32	52.14
KRH00223	Soybean	cytosol, nucleus	52.89	50.63
KRH49366	Soybean	cytosol, nucleus	53.16	50.5
KRH73443	Soybean	cytosol	50.0	49.22
KRG89834	Soybean	cytosol	50.53	48.98
KRH75885	Soybean	cytosol	51.05	48.74
KRH75889	Soybean	cytosol	50.0	47.5
KRH62448	Soybean	cytosol, vacuole	18.95	47.37
KRH14690	Soybean	cytosol	47.89	47.03
KRH65755	Soybean	cytosol	27.37	46.64
KRH73446	Soybean	cytosol	47.37	46.51
KRH65753	Soybean	cytosol	22.89	44.62
KRH14692	Soybean	cytosol	9.21	44.3
KRH14698	Soybean	cytosol	9.21	44.3
KRH75888	Soybean	cytosol	15.53	43.07
KRH23989	Soybean	cytosol	42.37	42.93
KRH23996	Soybean	cytosol	42.37	42.93
KRH23997	Soybean	cytosol	40.79	42.82
KRH14696	Soybean	cytosol	14.74	42.42
KRH65756	Soybean	cytosol	18.95	41.62
KRH23995	Soybean	nucleus	41.05	41.49
KRG88472	Soybean	cytosol	14.74	37.33
KRH23988	Soybean	endoplasmic reticulum, extracellular	8.68	36.67
KRH75887	Soybean	cytosol	18.42	35.71
KRH41009	Soybean	mitochondrion, plastid	30.0	26.7
KRH59676	Soybean	mitochondrion	29.47	26.29
KRH09146	Soybean	cytosol, nucleus	23.95	25.0
KRH38627	Soybean	cytosol	23.68	19.52

Protein Annotations

KEGG:00010+1.1.1.1	KEGG:00071+1.1.1.1	KEGG:00260+1.1.1.1	KEGG:00350+1.1.1.1	KEGG:00592+1.1.1.1	KEGG:00625+1.1.1.1
KEGG:00626+1.1.1.1	KEGG:00680+1.1.1.284	KEGG:00830+1.1.1.1	KEGG:00980+1.1.1.1	KEGG:00982+1.1.1.1	EntrezGene:100793008
MapMan:18.7.1	Gene3D:3.40.50.720	Gene3D:3.90.180.10	EMBL:ACUP02006105	InterPro:ADH_3	InterPro:ADH_C
InterPro:ADH_N	InterPro:ADH_Zn_CS	EnsemblPlantsGene:GLYMA_10G041000	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0006069	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009987
GO:GO:0016491	GO:GO:0046872	GO:GO:0051903	GO:GO:0055114	InterPro:GroES-like_sf	UniProt:I1L8I0
EnsemblPlants:KRH32257	ProteinID:KRH32257	ProteinID:KRH32257.1	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF08240
ScanProsite:PS00059	PANTHER:PTHR43880	MetaCyc:PWY-1801	MetaCyc:PWY-3162	MetaCyc:PWY-5057	MetaCyc:PWY-5076
MetaCyc:PWY-5078	MetaCyc:PWY-5079	MetaCyc:PWY-5082	MetaCyc:PWY-5480	MetaCyc:PWY-5486	MetaCyc:PWY-5751
MetaCyc:PWY-6313	MetaCyc:PWY-6333	MetaCyc:PWY-6342	MetaCyc:PWY-6454	MetaCyc:PWY-6587	MetaCyc:PWY-6802
MetaCyc:PWY-6871	MetaCyc:PWY-6901	MetaCyc:PWY-7013	MetaCyc:PWY-7111	MetaCyc:PWY-7118	MetaCyc:PWY-7396
MetaCyc:PWY-7798	SUPFAM:SSF50129	SUPFAM:SSF51735	TIGRFAMs:TIGR02818	UniParc:UPI000233D3C1	:

Description

hypothetical protein

Coordinates

chr10:-:3597307..3601274

Molecular Weight (calculated)

40684.1 Da

IEP (calculated)

6.937

GRAVY (calculated)

0.086

Length

380 amino acids

Sequence
(BLAST)

001: MATTQGQVIT CKAAVAWEPN KPLSIEDVQV APPQNGEVRI QILYTALCHT DAYTWSGKDP EGLFPCILGH EAAGIVESVG EGVTAVQPGD HVIPCYQAEC
101: GECKFCKSGK TNLCGKVRAA TGVGVMLSDR KSRFSVNGKP LYHFMGTSTF SQYTVVHDVS VAKIDPKAPL DKVCLLGCGV PTGLGAVWNT AKVEPGSIVA
201: IFGLGTVGLA VAEGAKAVGA SRIIGIDIDS NRFERAKNFG VTEFINPNEH EKPVQQVIVE LTDGGVDYSF ECIGNVLVMR SALECCHKGW GTSVIVGVAA
301: SGQEICTRPF QLVTGRVWKG TAFGGFKSRS QVPWLVDKYL KKEIKVDEYI THSLSLAEIN KAFDLMHEGG CLRCVLAMNV

Best Arabidopsis Sequence Match ( AT5G43940.1 )
(BLAST)

001: MATQGQVITC KAAVAYEPNK PLVIEDVQVA PPQAGEVRIK ILYTALCHTD AYTWSGKDPE GLFPCILGHE AAGIVESVGE GVTEVQAGDH VIPCYQAECR
101: ECKFCKSGKT NLCGKVRSAT GVGIMMNDRK SRFSVNGKPI YHFMGTSTFS QYTVVHDVSV AKIDPTAPLD KVCLLGCGVP TGLGAVWNTA KVEPGSNVAI
201: FGLGTVGLAV AEGAKTAGAS RIIGIDIDSK KYETAKKFGV NEFVNPKDHD KPIQEVIVDL TDGGVDYSFE CIGNVSVMRA ALECCHKGWG TSVIVGVAAS
301: GQEISTRPFQ LVTGRVWKGT AFGGFKSRTQ VPWLVEKYMN KEIKVDEYIT HNLTLGEINK AFDLLHEGTC LRCVLDTSK

Arabidopsis Description

HOT5S-(hydroxymethyl)glutathione dehydrogenase [Source:UniProtKB/TrEMBL;Acc:F4K7D6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.