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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • plastid 1
  • mitochondrion 1
  • extracellular 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, extracellular, mitochondrion, plastid
BaCelLo:cytosol
EpiLoc:plastid
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:extracellular
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6D01G371200.1 Wheat golgi 93.44 93.44
TraesCS6A01G386600.1 Wheat cytosol 93.18 93.18
TraesCS6B01G425700.1 Wheat cytosol 92.91 92.91
Os02t0815500-01 Rice plasma membrane, plastid 92.65 92.65
GSMUA_Achr1P05790_001 Banana cytosol, plasma membrane 91.34 91.82
CDY22323 Canola cytosol 90.81 91.29
CDX94738 Canola cytosol 90.81 91.29
Bra033706.1-P Field mustard cytosol 90.81 91.29
VIT_07s0005g04600.t01 Wine grape cytosol 56.43 91.1
CDY13136 Canola cytosol 90.55 91.03
CDY36960 Canola cytosol 90.03 90.5
PGSC0003DMT400019942 Potato cytosol 89.76 90.24
VIT_07s0005g04610.t01 Wine grape cytosol 28.08 88.43
KRG95774 Soybean cytosol, nucleus 87.93 88.39
KRH67486 Soybean nucleus 87.66 88.13
AT5G43940.2 Thale cress cytosol 90.03 87.72
KRH32257 Soybean cytosol 87.14 87.37
Solyc09g064370.2.1 Tomato nucleus 86.09 85.86
Bra027516.1-P Field mustard extracellular 90.03 84.48
KRH19643 Soybean cytosol 24.15 80.0
HORVU6Hr1G090260.1 Barley cytosol 92.91 70.52
Zm00001d018468_P001 Maize plastid 85.3 62.38
KXG37606 Sorghum cytosol 58.53 58.84
EES08380 Sorghum cytosol 58.01 58.31
KXG28254 Sorghum cytosol 39.9 56.72
EES07202 Sorghum cytosol 51.71 51.3
EER91716 Sorghum cytosol 53.28 50.75
EER91718 Sorghum cytosol 52.23 50.51
KXG40001 Sorghum cytosol 47.51 47.51
KXG36722 Sorghum cytosol 47.77 45.61
KXG36724 Sorghum cytosol 41.99 44.2
KXG39999 Sorghum cytosol 44.88 41.2
KXG24208 Sorghum mitochondrion 29.66 26.84
EES15252 Sorghum cytosol 23.36 23.92
Protein Annotations
KEGG:00010+1.1.1.1KEGG:00071+1.1.1.1KEGG:00260+1.1.1.1KEGG:00350+1.1.1.1KEGG:00592+1.1.1.1KEGG:00625+1.1.1.1
KEGG:00626+1.1.1.1KEGG:00680+1.1.1.284KEGG:00830+1.1.1.1KEGG:00980+1.1.1.1KEGG:00982+1.1.1.1MapMan:18.7.1
Gene3D:3.40.50.720Gene3D:3.90.180.10EntrezGene:8056438InterPro:ADH_3InterPro:ADH_CInterPro:ADH_N
InterPro:ADH_Zn_CSUniProt:C5XVU9EnsemblPlants:EES06008ProteinID:EES06008ProteinID:EES06008.1GO:GO:0000003
GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0005777GO:GO:0005829GO:GO:0006069GO:GO:0006091GO:GO:0006950
GO:GO:0007275GO:GO:0008150GO:GO:0008152GO:GO:0008219GO:GO:0008270GO:GO:0009628
GO:GO:0009791GO:GO:0009987GO:GO:0010286GO:GO:0016491GO:GO:0046292GO:GO:0046872
GO:GO:0048316GO:GO:0051903GO:GO:0055114GO:GO:0080007InterPro:GroES-like_sfInterPro:NAD(P)-bd_dom_sf
PFAM:PF00107PFAM:PF08240ScanProsite:PS00059PANTHER:PTHR43880MetaCyc:PWY-1801MetaCyc:PWY-3162
MetaCyc:PWY-5057MetaCyc:PWY-5076MetaCyc:PWY-5078MetaCyc:PWY-5079MetaCyc:PWY-5082MetaCyc:PWY-5480
MetaCyc:PWY-5486MetaCyc:PWY-5751MetaCyc:PWY-6313MetaCyc:PWY-6333MetaCyc:PWY-6342MetaCyc:PWY-6454
MetaCyc:PWY-6587MetaCyc:PWY-6802MetaCyc:PWY-6871MetaCyc:PWY-6901MetaCyc:PWY-7013MetaCyc:PWY-7111
MetaCyc:PWY-7118MetaCyc:PWY-7396MetaCyc:PWY-7798EnsemblPlantsGene:SORBI_3004G343200SUPFAM:SSF50129SUPFAM:SSF51735
unigene:Sbi.3835TIGRFAMs:TIGR02818UniParc:UPI0001A85BF6RefSeq:XP_002453032.1SEG:seg:
Description
hypothetical protein
Coordinates
chr4:+:67364634..67368957
Molecular Weight (calculated)
40756.2 Da
IEP (calculated)
6.866
GRAVY (calculated)
0.075
Length
381 amino acids
Sequence
(BLAST)
001: MASSTQGQVI TCKAAVAYEP NKPLVIEDVQ VAPPQAGEVR VKILFTALCH TDHYTWSGKD PEGLFPCILG HEAAGVVESV GEGVTEVQPG DHVIPCYQAE
101: CKECKFCKSG KTNLCGKVRS ATGVGVMMND MKSRFSVNGK PIYHFMGTST FSQYTVVHDV SVAKINPQAP LDKVCLLGCG VPTGLGAVWN TAKVEAGSIV
201: AVFGLGTVGL AVAEGAKAAG ASRIIGIDID NKKFDVAKNF GVTEFVNPKD HDKPIQQVLV DLTDGGVDYS FECIGNVSVM RAALECCHKG WGTSVIVGVA
301: ASGQEIATRP FQLVTGRVWK GTAFGGFKSR TQVPWLVDKY MNKEIKVDEY ITHNMNLADI NDAFHLLHEG GCLRCVLAMQ I
Best Arabidopsis Sequence Match ( AT5G43940.1 )
(BLAST)
001: MATQGQVITC KAAVAYEPNK PLVIEDVQVA PPQAGEVRIK ILYTALCHTD AYTWSGKDPE GLFPCILGHE AAGIVESVGE GVTEVQAGDH VIPCYQAECR
101: ECKFCKSGKT NLCGKVRSAT GVGIMMNDRK SRFSVNGKPI YHFMGTSTFS QYTVVHDVSV AKIDPTAPLD KVCLLGCGVP TGLGAVWNTA KVEPGSNVAI
201: FGLGTVGLAV AEGAKTAGAS RIIGIDIDSK KYETAKKFGV NEFVNPKDHD KPIQEVIVDL TDGGVDYSFE CIGNVSVMRA ALECCHKGWG TSVIVGVAAS
301: GQEISTRPFQ LVTGRVWKGT AFGGFKSRTQ VPWLVEKYMN KEIKVDEYIT HNLTLGEINK AFDLLHEGTC LRCVLDTSK
Arabidopsis Description
HOT5S-(hydroxymethyl)glutathione dehydrogenase [Source:UniProtKB/TrEMBL;Acc:F4K7D6]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.