CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 5
cytosol 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
EES07202

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G24760.1	EES07202	AT5G24760.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d051227_P001	Maize	extracellular	95.31	95.31
TraesCS6B01G263200.1	Wheat	cytosol	88.02	88.02
Os02t0637700-01	Rice	plastid	87.24	87.93
TraesCS6A01G234500.2	Wheat	cytosol	87.5	87.5
TraesCS6D01G217000.3	Wheat	cytosol	88.02	87.34
GSMUA_Achr4P25400_001	Banana	cytosol, endoplasmic reticulum	77.6	78.22
VIT_16s0039g00320.t01	Wine grape	cytosol	72.66	73.61
KRH38840	Soybean	cytosol	71.61	73.53
AT5G24760.1	Thale cress	cytosol	72.14	72.7
KRH08072	Soybean	cytosol	61.2	72.53
Bra020469.1-P	Field mustard	cytosol	71.09	71.84
CDY05455	Canola	cytosol	71.09	71.84
CDY05399	Canola	cytosol	71.09	71.84
Solyc06g072160.2.1	Tomato	cytosol	70.31	68.53
KRH62448	Soybean	cytosol, vacuole	26.56	67.11
KXG37606	Sorghum	cytosol	51.56	52.24
EES06008	Sorghum	cytosol	51.3	51.71
EES08380	Sorghum	cytosol	50.52	51.19
EER91716	Sorghum	cytosol	52.86	50.75
KXG40001	Sorghum	cytosol	49.48	49.87
KXG28254	Sorghum	cytosol	34.64	49.63
EER91718	Sorghum	cytosol	50.78	49.49
KXG36724	Sorghum	cytosol	44.79	47.51
KXG36722	Sorghum	cytosol	49.22	47.37
KXG39999	Sorghum	cytosol	48.44	44.82
KXG24208	Sorghum	mitochondrion	30.99	28.27
EES15252	Sorghum	cytosol	22.14	22.85

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:35.1	EntrezGene:8074802	InterPro:ADH_C	InterPro:ADH_N
InterPro:ADH_Zn_CS	UniProt:C5XY85	EnsemblPlants:EES07202	ProteinID:EES07202	ProteinID:EES07202.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0016491
GO:GO:0046872	GO:GO:0055114	InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF08240
InterPro:PKS_ER	ScanProsite:PS00059	PANTHER:PTHR43880	PANTHER:PTHR43880:SF5	SMART:SM00829	EnsemblPlantsGene:SORBI_3004G226500
SUPFAM:SSF50129	SUPFAM:SSF51735	unigene:Sbi.14609	UniParc:UPI0001A85FC2	RefSeq:XP_002454226.1	SEG:seg

Description

hypothetical protein

Coordinates

chr4:-:57645908..57649229

Molecular Weight (calculated)

40652.0 Da

IEP (calculated)

7.380

GRAVY (calculated)

0.063

Length

384 amino acids

Sequence
(BLAST)

001: MAAAAASSSP PAAITCRAAV AWGPGQPLVM EEVEVAPPGP MEIRVKVVST SVCRSDVTAW QSKAQPDLFP RVFGHEASGV VESVGEGVTE FQVGDHVLTV
101: FIGECKSCKH CVSGKSNMCQ KLGLERKGVM HSDQKTRFSV KGKPAYHYCA VSSFSEYTVV HSGCAVKVGL TVPMDRVCLL SCGVSAGLGA VWNVANVSKG
201: SSVAIFGLGT VGLSVAQGAK LRGASKIIGV DTNAEKQEKG KLFGVTDFIN PDELSEPVQQ VIKRITDGGV DYSFECVGDT GVVSTALQSC SDGWGVTVTL
301: GVPKTKPEVS AHYAFLLSGR TLKGSLFGGW RPKSDLPSLV DKYADKEIQV DGLVTHDIPF SEINKALELM LENKCLRCVI HMPQ

Best Arabidopsis Sequence Match ( AT5G24760.1 )
(BLAST)

001: MSASSSSFEQ PQVITCNAAV AWRAGEPLVM EEVEVSPPQP LEIRIKVVCT SLCRSDLSAW ESQSLLPRIF GHEAAGIVES IGEGVTEFEK GDHVLAVFTG
101: ECGSCRHCIS GKSNMCQVLG MERKGLMHSD QKTRFSIKGK PVYHYCAVSS FSEYTVVHSG CAVKVDPLAP LHKICLLSCG VAAGLGAAWN VADVQKGSSV
201: VIFGLGTVGL SVAQGAKLRG AAQILGVDIN PAKAEQAKTF GVTDFINSND LSEPIPQVIK RMTGGGADFS FECVGDTGIA TTALQSCSDG WGMTVTLGVP
301: KAKPEVSAHY GLFLSGKSLK GTLFGGWKPK SDLPSLIDKY MNKEIMIDEF ITHNLSFDEI NKAFVLMREG KCLRCVLHMP K

Arabidopsis Description

Alcohol dehydrogenase-like 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8LEB2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.