Factsheet for Zm00001d051227_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 4
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

extracellular: 20408568

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d051227_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G24760.1	Zm00001d051227_P001	AT5G24760.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES07202	Sorghum	cytosol	95.31	95.31
Os02t0637700-01	Rice	plastid	85.16	85.83
TraesCS6B01G263200.1	Wheat	cytosol	85.68	85.68
TraesCS6A01G234500.2	Wheat	cytosol	84.9	84.9
TraesCS6D01G217000.3	Wheat	cytosol	85.42	84.75
GSMUA_Achr4P25400_001	Banana	cytosol, endoplasmic reticulum	76.3	76.9
KRH38840	Soybean	cytosol	70.83	72.73
KRH08072	Soybean	cytosol	61.2	72.53
VIT_16s0039g00320.t01	Wine grape	cytosol	71.09	72.03
AT5G24760.1	Thale cress	cytosol	71.35	71.92
Bra020469.1-P	Field mustard	cytosol	70.05	70.79
CDY05455	Canola	cytosol	70.05	70.79
CDY05399	Canola	cytosol	70.05	70.79
Solyc06g072160.2.1	Tomato	cytosol	69.79	68.02
KRH62448	Soybean	cytosol, vacuole	26.56	67.11
Zm00001d033931_P002	Maize	cytosol, extracellular, plasma membrane	51.82	52.51
Zm00001d049059_P001	Maize	cytosol, extracellular	51.3	51.98
Zm00001d030347_P001	Maize	vacuole	52.86	48.56
Zm00001d027995_P001	Maize	cytosol, extracellular	46.35	47.34
Zm00001d027996_P001	Maize	cytosol	49.22	46.32
Zm00001d030348_P001	Maize	cytosol	47.92	43.19
Zm00001d018468_P001	Maize	plastid	44.79	33.01
Zm00001d049716_P001	Maize	mitochondrion	31.51	29.02
Zm00001d035032_P003	Maize	mitochondrion	30.99	28.61
Zm00001d036209_P001	Maize	cytosol	21.09	28.22
Zm00001d031727_P004	Maize	cytosol, extracellular, plastid	22.14	23.22

Protein Annotations

EntrezGene:100272578	Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:35.1	InterPro:ADH_C	InterPro:ADH_N
InterPro:ADH_Zn_CS	ProteinID:AQK53847.1	UniProt:B4FPE6	EMBL:BT038984	EMBL:BT061926	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0016491
GO:GO:0046872	GO:GO:0055114	InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF08240
InterPro:PKS_ER	ScanProsite:PS00059	PANTHER:PTHR43880	PANTHER:PTHR43880:SF5	SMART:SM00829	SUPFAM:SSF50129
SUPFAM:SSF51735	UniParc:UPI00017B7E59	EnsemblPlantsGene:Zm00001d051227	EnsemblPlants:Zm00001d051227_P001	EnsemblPlants:Zm00001d051227_T001	SEG:seg

Description

Alcohol dehydrogenase-like 6

Coordinates

chr4:-:149227927..149231063

Molecular Weight (calculated)

40801.3 Da

IEP (calculated)

7.596

GRAVY (calculated)

0.055

Length

384 amino acids

Sequence
(BLAST)

001: MAAADASSLP PSAITCRAAV AWGPGQPLVM EEVEVAPPGP MEIRVKVVST SVCRSDVTAW QSKAQLDLFP RVFGHEASGV VESVGEGVTE FQVGDHVLTV
101: FIGECKSCKH CVSGKSNMCQ KLGLERKGVM HSDQKTRFSV KGKPVYHYCA VSSFSEYTVV HSGCAVKVGL TVPMDRVCLL SCGVSSGLGA VWNVANVSKG
201: SSVAIFGLGT VGLSVAQGAK LRGASKIIGV DTNPEKQEKG KSFGVTDFIN PDELSEPVQQ VIKRITDGGV DYSFECVGDS GVVSTALQSC SDGWGVTVTL
301: GLPKGKLEVS THYAFLLSGR TLKGSMFGGW KPKSDLPSLV DKYAAKEIQV DGLVTHDIPF NEINKALELM LENKCLRCVI HMPR

Best Arabidopsis Sequence Match ( AT5G24760.1 )
(BLAST)

001: MSASSSSFEQ PQVITCNAAV AWRAGEPLVM EEVEVSPPQP LEIRIKVVCT SLCRSDLSAW ESQSLLPRIF GHEAAGIVES IGEGVTEFEK GDHVLAVFTG
101: ECGSCRHCIS GKSNMCQVLG MERKGLMHSD QKTRFSIKGK PVYHYCAVSS FSEYTVVHSG CAVKVDPLAP LHKICLLSCG VAAGLGAAWN VADVQKGSSV
201: VIFGLGTVGL SVAQGAKLRG AAQILGVDIN PAKAEQAKTF GVTDFINSND LSEPIPQVIK RMTGGGADFS FECVGDTGIA TTALQSCSDG WGMTVTLGVP
301: KAKPEVSAHY GLFLSGKSLK GTLFGGWKPK SDLPSLIDKY MNKEIMIDEF ITHNLSFDEI NKAFVLMREG KCLRCVLHMP K

Arabidopsis Description

Alcohol dehydrogenase-like 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8LEB2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.