Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 5
- plastid 1
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G24760.1 | KRH08072 | AT5G24760.1 | 21798944 |
| AT5G24760.1 | KRH38840 | AT5G24760.1 | 21798944 |
| AT5G24760.1 | KRH62448 | AT5G24760.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH38840 | Soybean | cytosol | 95.06 | 82.35 |
| VIT_16s0039g00320.t01 | Wine grape | cytosol | 78.4 | 67.02 |
| AT5G24760.1 | Thale cress | cytosol | 77.78 | 66.14 |
| Bra020469.1-P | Field mustard | cytosol | 76.54 | 65.26 |
| CDY05399 | Canola | cytosol | 76.54 | 65.26 |
| CDY05455 | Canola | cytosol | 76.23 | 65.0 |
| Os02t0637700-01 | Rice | plastid | 74.69 | 63.52 |
| KRH62448 | Soybean | cytosol, vacuole | 29.63 | 63.16 |
| GSMUA_Achr4P25400_001 | Banana | cytosol, endoplasmic reticulum | 74.07 | 62.99 |
| TraesCS6A01G234500.2 | Wheat | cytosol | 73.77 | 62.24 |
| TraesCS6D01G217000.3 | Wheat | cytosol | 74.07 | 62.02 |
| Solyc06g072160.2.1 | Tomato | cytosol | 75.31 | 61.93 |
| TraesCS6B01G263200.1 | Wheat | cytosol | 73.15 | 61.72 |
| Zm00001d051227_P001 | Maize | extracellular | 72.53 | 61.2 |
| EES07202 | Sorghum | cytosol | 72.53 | 61.2 |
| KRH64058 | Soybean | cytosol, endoplasmic reticulum | 54.94 | 46.72 |
| KRH64550 | Soybean | endoplasmic reticulum | 53.7 | 45.79 |
| KRH53384 | Soybean | cytosol, endoplasmic reticulum, mitochondrion | 53.7 | 45.67 |
| KRH32257 | Soybean | cytosol | 53.4 | 45.53 |
| KRH15944 | Soybean | endoplasmic reticulum | 52.78 | 45.0 |
| KRH67486 | Soybean | nucleus | 52.16 | 44.59 |
| KRG95774 | Soybean | cytosol, nucleus | 52.16 | 44.59 |
| KRH73443 | Soybean | cytosol | 52.47 | 44.04 |
| KRH14690 | Soybean | cytosol | 52.16 | 43.67 |
| KRG89834 | Soybean | cytosol | 52.78 | 43.62 |
| KRH14698 | Soybean | cytosol | 10.49 | 43.04 |
| KRH14692 | Soybean | cytosol | 10.49 | 43.04 |
| KRH16454 | Soybean | cytosol | 49.07 | 42.86 |
| KRH18052 | Soybean | cytosol | 49.69 | 42.48 |
| KRH73446 | Soybean | cytosol | 50.31 | 42.12 |
| KRH49366 | Soybean | cytosol, nucleus | 50.62 | 41.0 |
| KRH19643 | Soybean | cytosol | 14.51 | 40.87 |
| KRH00223 | Soybean | cytosol, nucleus | 50.0 | 40.81 |
| KRH75885 | Soybean | cytosol | 50.0 | 40.7 |
| KRH14696 | Soybean | cytosol | 16.36 | 40.15 |
| KRH75889 | Soybean | cytosol | 49.07 | 39.75 |
| KRH23988 | Soybean | endoplasmic reticulum, extracellular | 10.8 | 38.89 |
| KRH65755 | Soybean | cytosol | 26.54 | 38.56 |
| KRH75887 | Soybean | cytosol | 22.84 | 37.76 |
| KRH23989 | Soybean | cytosol | 42.59 | 36.8 |
| KRH23996 | Soybean | cytosol | 42.59 | 36.8 |
| KRH23997 | Soybean | cytosol | 40.43 | 36.19 |
| KRH23995 | Soybean | nucleus | 41.36 | 35.64 |
| KRH65756 | Soybean | cytosol | 18.52 | 34.68 |
| KRH65753 | Soybean | cytosol | 20.37 | 33.85 |
| KRH75888 | Soybean | cytosol | 13.58 | 32.12 |
| KRG88472 | Soybean | cytosol | 14.81 | 32.0 |
| KRH59676 | Soybean | mitochondrion | 27.78 | 21.13 |
| KRH41009 | Soybean | mitochondrion, plastid | 27.78 | 21.08 |
| KRH09146 | Soybean | cytosol, nucleus | 21.6 | 19.23 |
| KRH38627 | Soybean | cytosol | 21.91 | 15.4 |
Protein Annotations
| Gene3D:3.40.50.720 | MapMan:35.1 | EMBL:ACUP02010137 | InterPro:ADH_N | InterPro:ADH_Zn_CS | EnsemblPlantsGene:GLYMA_16G128100 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 |
| GO:GO:0016491 | GO:GO:0055114 | InterPro:GroES-like_sf | UniProt:K7MH10 | EnsemblPlants:KRH08072 | ProteinID:KRH08072 |
| ProteinID:KRH08072.1 | InterPro:NAD(P)-bd_dom_sf | PFAM:PF08240 | ScanProsite:PS00059 | PANTHER:PTHR43880 | PANTHER:PTHR43880:SF5 |
| SUPFAM:SSF50129 | SUPFAM:SSF51735 | UniParc:UPI000294ED43 | : | : | : |
Description
hypothetical protein
Coordinates
chr16:-:28022569..28027078
Molecular Weight (calculated)
34944.5 Da
IEP (calculated)
7.522
GRAVY (calculated)
0.148
Length
324 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTPQVITCK AAVAWGAGEA LVIEEVEVSP PQPMEIRIKV VSTSLCRSDL SAWESHAIFP RIFGHEASGI VESVGQGVTE FKEGDHVLTV FIGECISCRQ
101: CTSGKSNTCL KGEPVYDYCA VSSFSEYTVV HSGCAVKLSP LAPLEKICLL SCGVAAGLGA AWNVADVSKG STVVIFGLGT VGLSVAQASK LRGASRIIGV
201: DNNPQKCENA FGVTEVVIKC ITDGRADFSF ECGWGLTVTL GVPKVKLEMS ARYGLLLMGR TLKGSLFWGW KPKSDLPSLV KKYLNKEIQI DDYITHNLPF
301: DDINKAFNLM KEGKCQRCVI HMPR
101: CTSGKSNTCL KGEPVYDYCA VSSFSEYTVV HSGCAVKLSP LAPLEKICLL SCGVAAGLGA AWNVADVSKG STVVIFGLGT VGLSVAQASK LRGASRIIGV
201: DNNPQKCENA FGVTEVVIKC ITDGRADFSF ECGWGLTVTL GVPKVKLEMS ARYGLLLMGR TLKGSLFWGW KPKSDLPSLV KKYLNKEIQI DDYITHNLPF
301: DDINKAFNLM KEGKCQRCVI HMPR
001: MSASSSSFEQ PQVITCNAAV AWRAGEPLVM EEVEVSPPQP LEIRIKVVCT SLCRSDLSAW ESQSLLPRIF GHEAAGIVES IGEGVTEFEK GDHVLAVFTG
101: ECGSCRHCIS GKSNMCQVLG MERKGLMHSD QKTRFSIKGK PVYHYCAVSS FSEYTVVHSG CAVKVDPLAP LHKICLLSCG VAAGLGAAWN VADVQKGSSV
201: VIFGLGTVGL SVAQGAKLRG AAQILGVDIN PAKAEQAKTF GVTDFINSND LSEPIPQVIK RMTGGGADFS FECVGDTGIA TTALQSCSDG WGMTVTLGVP
301: KAKPEVSAHY GLFLSGKSLK GTLFGGWKPK SDLPSLIDKY MNKEIMIDEF ITHNLSFDEI NKAFVLMREG KCLRCVLHMP K
101: ECGSCRHCIS GKSNMCQVLG MERKGLMHSD QKTRFSIKGK PVYHYCAVSS FSEYTVVHSG CAVKVDPLAP LHKICLLSCG VAAGLGAAWN VADVQKGSSV
201: VIFGLGTVGL SVAQGAKLRG AAQILGVDIN PAKAEQAKTF GVTDFINSND LSEPIPQVIK RMTGGGADFS FECVGDTGIA TTALQSCSDG WGMTVTLGVP
301: KAKPEVSAHY GLFLSGKSLK GTLFGGWKPK SDLPSLIDKY MNKEIMIDEF ITHNLSFDEI NKAFVLMREG KCLRCVLHMP K
Arabidopsis Description
Alcohol dehydrogenase-like 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8LEB2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.