Factsheet for TraesCS6D01G217000.3

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 4
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS6A01G234500.2
TraesCS6B01G263200.1
TraesCS6D01G217000.3

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G24760.1	TraesCS6A01G234500.2	AT5G24760.1	21798944
AT5G24760.1	TraesCS6B01G263200.1	AT5G24760.1	21798944
AT5G24760.1	TraesCS6D01G217000.3	AT5G24760.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G263200.1	Wheat	cytosol	98.45	99.22
TraesCS6A01G234500.2	Wheat	cytosol	98.45	99.22
Os02t0637700-01	Rice	plastid	87.86	89.24
EES07202	Sorghum	cytosol	87.34	88.02
Zm00001d051227_P001	Maize	extracellular	84.75	85.42
GSMUA_Achr4P25400_001	Banana	cytosol, endoplasmic reticulum	75.19	76.38
KRH38840	Soybean	cytosol	72.87	75.4
VIT_16s0039g00320.t01	Wine grape	cytosol	72.61	74.14
KRH08072	Soybean	cytosol	62.02	74.07
Bra020469.1-P	Field mustard	cytosol	72.09	73.42
CDY05399	Canola	cytosol	72.09	73.42
CDY05455	Canola	cytosol	72.09	73.42
AT5G24760.1	Thale cress	cytosol	72.09	73.23
Solyc06g072160.2.1	Tomato	cytosol	71.32	70.05
KRH62448	Soybean	cytosol, vacuole	26.1	66.45
TraesCS4D01G103300.1	Wheat	cytosol	46.25	51.59
TraesCS4D01G103000.1	Wheat	golgi	50.13	51.19
TraesCS4D01G303900.1	Wheat	cytosol	50.9	50.9
TraesCS1D01G052200.1	Wheat	cytosol	51.42	50.51
TraesCS6D01G371200.1	Wheat	golgi	49.35	50.13
TraesCS4D01G103100.1	Wheat	cytosol	48.84	49.87
TraesCS5D01G196300.2	Wheat	cytosol	48.84	49.87
TraesCS4D01G303800.1	Wheat	cytosol	48.58	49.21
TraesCS1D01G376300.1	Wheat	cytosol, golgi	48.06	49.08
TraesCS2D01G170900.1	Wheat	cytosol	49.35	45.91
TraesCS2D01G170800.1	Wheat	cytosol	45.22	45.57
TraesCS7D01G319100.1	Wheat	mitochondrion	28.68	26.75
TraesCS7D01G269800.1	Wheat	cytosol	23.0	24.38

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:35.1	InterPro:ADH_C	InterPro:ADH_N	InterPro:ADH_Zn_CS
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270
GO:GO:0016491	GO:GO:0055114	InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF08240
ScanProsite:PS00059	PANTHER:PTHR43880	PANTHER:PTHR43880:SF5	SUPFAM:SSF50129	SUPFAM:SSF51735	EnsemblPlantsGene:TraesCS6D01G217000
EnsemblPlants:TraesCS6D01G217000.3	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr6D:-:306709628..306712237

Molecular Weight (calculated)

40907.2 Da

IEP (calculated)

6.947

GRAVY (calculated)

0.054

Length

387 amino acids

Sequence
(BLAST)

001: MAAAASSSSP PAVITCRAAV AWGPGQALVM EDVEVAPPGP LEIRVKVVST SICRSDVTQW QSTAQPDLFP RIFGHEASGV VESVGEGVTE FQVGDHALTV
101: FIGECMSCKH CVSGKSNMCQ TLGLERKGVM HSDQTTRFSI GGKPVYHYCA VSSFSEYAVV HSGCAVKVSP TMPMDRICLL SCGASAGLGA AWNVADVSKG
201: SSVVIFGLGT VGLSVAQGAK LRGASKIIGV DTNPDKQEKG KAFGVTDFIN PAELNEPVQQ VVKRLTDGGA DYSFECVGDT GVVSTALQSC SDGWGLTVTL
301: GVPKAKPEVS AHYGLLLSGR TLKGSLFGGW RPKSDIPLLV EKYANKEIQV DGLVTHDMPF SDINKALELM LQNRCLRCVI HMPKRQD

Best Arabidopsis Sequence Match ( AT5G24760.1 )
(BLAST)

001: MSASSSSFEQ PQVITCNAAV AWRAGEPLVM EEVEVSPPQP LEIRIKVVCT SLCRSDLSAW ESQSLLPRIF GHEAAGIVES IGEGVTEFEK GDHVLAVFTG
101: ECGSCRHCIS GKSNMCQVLG MERKGLMHSD QKTRFSIKGK PVYHYCAVSS FSEYTVVHSG CAVKVDPLAP LHKICLLSCG VAAGLGAAWN VADVQKGSSV
201: VIFGLGTVGL SVAQGAKLRG AAQILGVDIN PAKAEQAKTF GVTDFINSND LSEPIPQVIK RMTGGGADFS FECVGDTGIA TTALQSCSDG WGMTVTLGVP
301: KAKPEVSAHY GLFLSGKSLK GTLFGGWKPK SDLPSLIDKY MNKEIMIDEF ITHNLSFDEI NKAFVLMREG KCLRCVLHMP K

Arabidopsis Description

Alcohol dehydrogenase-like 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8LEB2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.