Factsheet for TraesCS2D01G170800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G189700.1	Wheat	peroxisome	83.07	81.38
TraesCS2D01G170900.1	Wheat	cytosol	86.72	80.05
TraesCS2A01G163900.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	88.54	78.52
HORVU2Hr1G029960.2	Barley	mitochondrion	52.86	73.29
Os07t0621800-01	Rice	cytosol	73.96	72.82
KXG36722	Sorghum	cytosol	72.14	69.42
KXG36724	Sorghum	cytosol	64.32	68.23
VIT_18s0001g06360.t01	Wine grape	cytosol	59.9	59.43
TraesCS4D01G303800.1	Wheat	cytosol	58.07	58.38
Solyc04g074540.2.1	Tomato	cytosol	55.47	55.47
PGSC0003DMT400079175	Potato	cytosol	55.21	54.78
TraesCS4D01G303900.1	Wheat	cytosol	54.69	54.26
Bra031390.1-P	Field mustard	cytosol	54.95	54.24
CDY21362	Canola	cytosol	54.95	54.1
CDY04816	Canola	cytosol	54.69	53.85
AT1G22440.1	Thale cress	cytosol	53.65	53.37
CDY00452	Canola	cytosol	53.91	53.08
CDY41481	Canola	cytosol	53.65	52.82
AT4G22110.2	Thale cress	cytosol	53.39	52.7
CDX91678	Canola	cytosol	53.39	52.56
AT1G22430.1	Thale cress	cytosol	52.34	51.8
Solyc04g074530.2.1	Tomato	cytosol, plastid	52.34	51.02
CDY71245	Canola	cytosol	33.33	50.59
CDX82904	Canola	cytosol	51.04	50.39
Bra013586.1-P	Field mustard	cytosol	28.91	49.55
CDX79124	Canola	cytosol	46.61	49.31
TraesCS5D01G196300.2	Wheat	cytosol	45.83	46.44
TraesCS1D01G376300.1	Wheat	cytosol, golgi	45.31	45.91
TraesCS4D01G103000.1	Wheat	golgi	44.79	45.38
TraesCS4D01G103300.1	Wheat	cytosol	40.89	45.24
TraesCS6D01G217000.3	Wheat	cytosol	45.57	45.22
TraesCS1D01G052200.1	Wheat	cytosol	46.35	45.18
TraesCS4D01G103100.1	Wheat	cytosol	44.53	45.12
TraesCS6D01G371200.1	Wheat	golgi	44.01	44.36
GSMUA_Achr7P11730_001	Banana	plastid	57.29	34.87
Bra012327.1-P	Field mustard	cytosol	52.86	34.0
TraesCS7D01G319100.1	Wheat	mitochondrion	27.08	25.06
GSMUA_Achr7P11720_001	Banana	mitochondrion, nucleus, plastid	58.59	23.94
TraesCS7D01G269800.1	Wheat	cytosol	20.57	21.64

Protein Annotations

EnsemblPlants:TraesCS2D01G170800.1	EnsemblPlantsGene:TraesCS2D01G170800	Gene3D:3.40.50.720	Gene3D:3.90.180.10	GO:GO:0008150	GO:GO:0008152
GO:GO:0055114	InterPro:ADH_C	InterPro:ADH_N	InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR43880
PANTHER:PTHR43880:SF15	PFAM:PF00107	PFAM:PF08240	SEG:seg	SUPFAM:SSF50129	SUPFAM:SSF51735
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr2D:+:114675756..114695622

Molecular Weight (calculated)

41046.5 Da

IEP (calculated)

5.853

GRAVY (calculated)

0.009

Length

384 amino acids

Sequence
(BLAST)

001: MEQNTATKPI RCKAAVSKVA GQPLEMEEVE VAPPRAHEVR IRILCTSLCH TDLTFWRLKD FPGQHPIILR HEAAGVGEHV HEVAVGDTVV PVFSAQCGDC
101: PDWRLPLRPQ LPARPGMPRD GTARFSFAAT GEPIHNFTGV SSFTEYTVVD VAHVVRLKPG VPPEKACLLS CGVSTGVGAA WKVAAVEPGS SVAVFGLGVV
201: GLAVAQGCRM RGAKQIVGVD LNPEKGRISG KRLGITDFIN PNDTGEKAVS EVVKEMTGGG ADYCFECIGS TSVMAEAFQS SRKGWGKTIA LGVSSGVAPI
301: SIPPEDILMG RSLVGSLFGG LKPTADIPIL AQKYVDKELE LDEFVTHEMR FDDINRAFEL LTQCFIWMGG DRENGVGVEA LDNA

Best Arabidopsis Sequence Match ( AT1G22430.2 )
(BLAST)

001: MDKTFFSSNE GKPITCKAAI CRKAGEALVI EDIHVDPPQA YEVRIKILCT SLCHTDLTFW KLSFGPISRF PRILGHEAVG VVESIGENVD GFKQGDVVLP
101: VFHPYCEECK DCKSSKTNWC DRYAEDFISN TRRYGMASRF KDSSGEVIHH FLFVSSFSEY TVVDIAHLVK ISPEIPVDKA ALLSCGVSTG IGAAWKVANV
201: EEGSTIAIFG LGAVGLAVAE GARLRGAAKI IGIDTNSDKF ELGKKFGFTD FINPTLCGEK KISEVIKEMT EGGVDYSFEC VGLASLLNEA FISTRTGTGK
301: TVMLGMEKHA APISLGSFDL LRGRVICGSL FGGLKSKLDI PILVDHYLKK ELNLDSFITH ELNFKEINKA FALLEEGKSL RCILWMDK

Arabidopsis Description

Alcohol dehydrogenase-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SK86]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.