Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 3
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G189700.1 | Wheat | peroxisome | 80.14 | 56.63 |
| TraesCS2B01G189800.1 | Wheat | peroxisome | 79.42 | 54.19 |
| TraesCS2D01G170900.1 | Wheat | cytosol | 79.42 | 52.88 |
| TraesCS2D01G170800.1 | Wheat | cytosol | 73.29 | 52.86 |
| TraesCS2A01G163900.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome | 80.87 | 51.73 |
| Os07t0621800-01 | Rice | cytosol | 69.31 | 49.23 |
| KXG36722 | Sorghum | cytosol | 67.51 | 46.87 |
| HORVU5Hr1G010490.1 | Barley | cytosol | 16.25 | 45.0 |
| HORVU1Hr1G003130.1 | Barley | cytosol | 21.66 | 44.78 |
| HORVU3Hr1G044960.1 | Barley | cytosol, plastid | 16.97 | 42.73 |
| HORVU6Hr1G063060.1 | Barley | cytosol | 16.25 | 42.06 |
| KXG36724 | Sorghum | cytosol | 53.43 | 40.88 |
| VIT_18s0001g06360.t01 | Wine grape | cytosol | 55.6 | 39.79 |
| HORVU4Hr1G078460.7 | Barley | cytosol | 53.07 | 37.89 |
| HORVU7Hr1G058160.4 | Barley | cytosol | 28.88 | 37.74 |
| Bra031390.1-P | Field mustard | cytosol | 52.71 | 37.53 |
| CDY21362 | Canola | cytosol | 52.71 | 37.44 |
| CDX79124 | Canola | cytosol | 48.74 | 37.19 |
| CDY04816 | Canola | cytosol | 52.35 | 37.18 |
| CDY00452 | Canola | cytosol | 51.99 | 36.92 |
| AT4G22110.2 | Thale cress | cytosol | 51.62 | 36.76 |
| AT1G22440.1 | Thale cress | cytosol | 50.9 | 36.53 |
| Solyc04g074540.2.1 | Tomato | cytosol | 50.54 | 36.46 |
| PGSC0003DMT400079175 | Potato | cytosol | 50.9 | 36.43 |
| CDX91678 | Canola | cytosol | 51.26 | 36.41 |
| HORVU5Hr1G051820.1 | Barley | cytosol | 27.8 | 36.32 |
| AT1G22430.1 | Thale cress | cytosol | 50.18 | 35.82 |
| CDY41481 | Canola | cytosol | 50.18 | 35.64 |
| CDX82904 | Canola | cytosol | 49.1 | 34.96 |
| HORVU2Hr1G020900.3 | Barley | cytosol | 31.05 | 33.73 |
| HORVU0Hr1G008870.3 | Barley | cytosol | 31.05 | 32.33 |
| Solyc04g074530.2.1 | Tomato | cytosol, plastid | 44.77 | 31.47 |
| HORVU4Hr1G016770.2 | Barley | cytosol | 39.71 | 28.95 |
| HORVU3Hr1G034820.7 | Barley | cytosol | 30.69 | 28.81 |
| HORVU4Hr1G016810.8 | Barley | cytosol | 38.63 | 28.23 |
| HORVU0Hr1G010220.2 | Barley | cytosol | 22.02 | 26.87 |
| GSMUA_Achr7P11730_001 | Banana | plastid | 57.76 | 25.36 |
| CDY71245 | Canola | cytosol | 21.66 | 23.72 |
| HORVU6Hr1G090260.1 | Barley | cytosol | 42.6 | 23.51 |
| Bra012327.1-P | Field mustard | cytosol | 50.54 | 23.45 |
| HORVU5Hr1G057090.5 | Barley | cytosol | 30.69 | 22.37 |
| Bra013586.1-P | Field mustard | cytosol | 16.61 | 20.54 |
| GSMUA_Achr7P11720_001 | Banana | mitochondrion, nucleus, plastid | 57.76 | 17.02 |
| HORVU7Hr1G077200.1 | Barley | mitochondrion | 24.91 | 15.54 |
| HORVU4Hr1G016780.2 | Barley | cytosol | 8.66 | 11.76 |
| HORVU7Hr1G056770.2 | Barley | cytosol | 17.33 | 11.62 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G029960.2 | EnsemblPlantsGene:HORVU2Hr1G029960 | Gene3D:3.40.50.720 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0055114 |
| InterPro:ADH_C | InterPro:GroES-like_sf | InterPro:NAD(P)-bd_dom_sf | PANTHER:PTHR43880 | PANTHER:PTHR43880:SF15 | PFAM:PF00107 |
| SEG:seg | SUPFAM:SSF50129 | SUPFAM:SSF51735 | UniParc:UPI000B46E4E5 | UniProt:A0A287HJ61 | MapMan:35.1 |
Description
No Description!
Coordinates
chrchr2H:+:108974596..108977238
Molecular Weight (calculated)
29159.1 Da
IEP (calculated)
8.561
GRAVY (calculated)
-0.033
Length
277 amino acids
Sequence
(BLAST)
(BLAST)
001: MKQPAWWRAW GSTCTRWPSG TQWCRYSRRS AATAQTASRT AATSAPGSPP XCLLSCGVST GVGAAWKVAA VEPGSSVAVF GLGVVGLAVA QGCRMRGAKR
101: IIGVDLNTEK WDIGKRLGIT DFINPNDIGE KAVSEVITEM TGGGADYCFE CIGSTSVMAE AFQSSRKGWG KTVVLGVSRG GAPISIPPND ILWGRSVVGS
201: LFGGLKPKTD VPILAQKYMD KKLELDEFVT HEMGFDDING AFELLTQGKC LRCIIWMDGA KETGVGVENG GACKAKA
101: IIGVDLNTEK WDIGKRLGIT DFINPNDIGE KAVSEVITEM TGGGADYCFE CIGSTSVMAE AFQSSRKGWG KTVVLGVSRG GAPISIPPND ILWGRSVVGS
201: LFGGLKPKTD VPILAQKYMD KKLELDEFVT HEMGFDDING AFELLTQGKC LRCIIWMDGA KETGVGVENG GACKAKA
001: MDKTFFSSNE GKPITCKAAI CRKAGEALVI EDIHVDPPQA YEVRIKILCT SLCHTDLTFW KLSFGPISRF PRILGHEAVG VVESIGENVD GFKQGDVVLP
101: VFHPYCEECK DCKSSKTNWC DRYAEDFISN TRRYGMASRF KDSSGEVIHH FLFVSSFSEY TVVDIAHLVK ISPEIPVDKA ALLSCGVSTG IGAAWKVANV
201: EEGSTIAIFG LGAVGLAVAE GARLRGAAKI IGIDTNSDKF ELGKKFGFTD FINPTLCGEK KISEVIKEMT EGGVDYSFEC VGLASLLNEA FISTRTGTGK
301: TVMLGMEKHA APISLGSFDL LRGRVICGSL FGGLKSKLDI PILVDHYLKK ELNLDSFITH ELNFKEINKA FALLEEGKSL RCILWMDK
101: VFHPYCEECK DCKSSKTNWC DRYAEDFISN TRRYGMASRF KDSSGEVIHH FLFVSSFSEY TVVDIAHLVK ISPEIPVDKA ALLSCGVSTG IGAAWKVANV
201: EEGSTIAIFG LGAVGLAVAE GARLRGAAKI IGIDTNSDKF ELGKKFGFTD FINPTLCGEK KISEVIKEMT EGGVDYSFEC VGLASLLNEA FISTRTGTGK
301: TVMLGMEKHA APISLGSFDL LRGRVICGSL FGGLKSKLDI PILVDHYLKK ELNLDSFITH ELNFKEINKA FALLEEGKSL RCILWMDK
Arabidopsis Description
Alcohol dehydrogenase-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SK86]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.