CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY21362	Canola	cytosol	98.46	98.46
Bra031390.1-P	Field mustard	cytosol	98.21	98.46
AT1G22430.1	Thale cress	cytosol	85.9	86.34
CDX91678	Canola	cytosol	82.31	82.31
CDY71245	Canola	cytosol	53.08	81.82
CDY41481	Canola	cytosol	81.28	81.28
CDX82904	Canola	cytosol	79.74	79.95
CDX79124	Canola	cytosol	74.1	79.61
CDY00452	Canola	cytosol	78.21	78.21
VIT_18s0001g06360.t01	Wine grape	cytosol	63.85	64.34
PGSC0003DMT400079175	Potato	cytosol	63.08	63.57
Solyc04g074540.2.1	Tomato	cytosol	61.28	62.24
Os03t0189400-01	Rice	cytosol, plasma membrane	58.72	60.1
CDY39423	Canola	cytosol	59.74	59.9
KXG36722	Sorghum	cytosol	61.03	59.65
CDY64947	Canola	cytosol	59.49	59.64
Os07t0621800-01	Rice	cytosol	59.23	59.23
KXG40001	Sorghum	cytosol	57.69	59.06
TraesCS4D01G303800.1	Wheat	cytosol	56.67	57.85
TraesCS4B01G305700.1	Wheat	cytosol	56.92	57.22
Solyc04g074530.2.1	Tomato	cytosol, plastid	57.69	57.11
TraesCS4D01G303900.1	Wheat	cytosol	56.67	57.11
TraesCS4A01G406200.1	Wheat	golgi	56.41	56.7
TraesCS2B01G189700.1	Wheat	peroxisome	56.92	56.63
HORVU4Hr1G078460.7	Barley	cytosol	56.15	56.44
TraesCS2B01G189800.1	Wheat	peroxisome	58.46	56.16
KXG36724	Sorghum	cytosol	51.79	55.8
Os03t0189600-01	Rice	cytosol, plasma membrane, plastid	54.1	55.67
TraesCS4B01G305600.1	Wheat	cytosol	58.21	55.37
TraesCS2D01G170900.1	Wheat	cytosol	58.46	54.81
TraesCS2D01G170800.1	Wheat	cytosol	53.85	54.69
Zm00001d027996_P001	Maize	cytosol	57.18	54.66
Zm00001d027995_P001	Maize	cytosol, extracellular	52.05	53.99
KXG39999	Sorghum	cytosol	56.15	52.77
HORVU3Hr1G044960.1	Barley	cytosol, plastid	14.87	52.73
HORVU2Hr1G029960.2	Barley	mitochondrion	37.18	52.35
CDY26918	Canola	cytosol	33.85	52.17
TraesCS2A01G163900.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	57.18	51.5
CDY59757	Canola	cytosol	49.74	51.05
CDX88342	Canola	cytosol	49.23	50.66
CDX87542	Canola	cytosol	48.97	50.4
CDY13798	Canola	cytosol	49.23	50.26
TraesCS4A01G406100.2	Wheat	cytosol	51.03	50.25
CDX93818	Canola	cytosol	50.51	50.0
CDY01241	Canola	cytosol	50.51	50.0
CDX68065	Canola	cytosol	48.21	49.6
CDX79188	Canola	cytosol	47.95	49.34
CDY05455	Canola	cytosol	46.41	47.63
CDY05399	Canola	cytosol	46.41	47.63
CDY22323	Canola	cytosol	45.64	46.97
CDX94738	Canola	cytosol	45.64	46.97
CDY13136	Canola	cytosol	45.64	46.97
CDY36960	Canola	cytosol	45.38	46.7
CDX73268	Canola	cytosol	4.36	37.78
CDX73269	Canola	cytosol	38.72	36.56
GSMUA_Achr7P11730_001	Banana	plastid	57.44	35.5
CDX89070	Canola	cytosol	18.72	32.02
CDX86557	Canola	cytosol, extracellular	7.44	28.71
CDY38887	Canola	cytosol	4.1	28.07
CDX81190	Canola	cytosol	7.95	27.19
CDX97482	Canola	cytosol	14.1	25.58
CDY41524	Canola	mitochondrion	27.44	24.6
GSMUA_Achr7P11720_001	Banana	mitochondrion, nucleus, plastid	59.23	24.57
CDY00508	Canola	cytosol	21.79	24.57
CDX84427	Canola	mitochondrion	26.92	24.14
CDY58156	Canola	cytosol	22.31	23.9
CDY30977	Canola	cytosol	16.67	22.41
CDY32607	Canola	cytosol	9.23	22.36
CDX86558	Canola	mitochondrion	7.18	20.0
CDX86559	Canola	extracellular	3.33	17.57

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:35.1	GO:A0A078EU96	InterPro:ADH_C	InterPro:ADH_N
InterPro:ADH_Zn_CS	EnsemblPlants:CDY04816	ProteinID:CDY04816	ProteinID:CDY04816.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0016491	GO:GO:0055114
EnsemblPlantsGene:GSBRNA2T00119518001	InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF08240	ScanProsite:PS00059
PANTHER:PTHR43880	PANTHER:PTHR43880:SF10	SUPFAM:SSF50129	SUPFAM:SSF51735	UniParc:UPI0004EED3FC	SEG:seg

Description

BnaC05g17730D

Coordinates

chrLK031957:-:1023643..1026157

Molecular Weight (calculated)

42420.3 Da

IEP (calculated)

7.237

GRAVY (calculated)

0.007

Length

390 amino acids

Sequence
(BLAST)

001: MDKTSSFSIH KGKPIRCKAA LCRKAREALV MEEIQVDPPQ AYEVRIKIIC TSLCHTDVTF WKLDSGPLAR FPRILGHESV GLVESVGEHV DGFKQGDVVL
101: PVFHPNCEEC KDCKSSKSNW CARYANDSIS NTRRYGMASR FKDSTGEDIH HFLFVSSFSE YTVVDIAHLV KISPDIPVQK AALLSCGVST AGVGAAWKVA
201: NVEEGSTVAV FGLGAVGLAA AEGARLRGAA KIIGVDLNPD KFELGKKFGF TDFVNPTLCG EKKVSEVIKE MTGGGVDYSF ECVGLPSILS EAFISTRTGS
301: GKTVMLGMGK HAAPISLGSF DLLSGRTICG SLFGGLKSKL DIPVLVDHYL KKELNLDSFI THELKFQEIN KAFELLEEGK TLRCIIWMDN

Best Arabidopsis Sequence Match ( AT1G22430.2 )
(BLAST)

001: MDKTFFSSNE GKPITCKAAI CRKAGEALVI EDIHVDPPQA YEVRIKILCT SLCHTDLTFW KLSFGPISRF PRILGHEAVG VVESIGENVD GFKQGDVVLP
101: VFHPYCEECK DCKSSKTNWC DRYAEDFISN TRRYGMASRF KDSSGEVIHH FLFVSSFSEY TVVDIAHLVK ISPEIPVDKA ALLSCGVSTG IGAAWKVANV
201: EEGSTIAIFG LGAVGLAVAE GARLRGAAKI IGIDTNSDKF ELGKKFGFTD FINPTLCGEK KISEVIKEMT EGGVDYSFEC VGLASLLNEA FISTRTGTGK
301: TVMLGMEKHA APISLGSFDL LRGRVICGSL FGGLKSKLDI PILVDHYLKK ELNLDSFITH ELNFKEINKA FALLEEGKSL RCILWMDK

Arabidopsis Description

Alcohol dehydrogenase-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SK86]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.