Factsheet for Os03t0189600-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, cytosol

Predictor Summary:

cytosol 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane, plastid
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

plasma membrane: 27800704
plastid: 27992503

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU4Hr1G078460.7	Barley	cytosol	79.95	78.09
TraesCS4A01G406200.1	Wheat	golgi	79.68	77.84
TraesCS4D01G303900.1	Wheat	cytosol	79.16	77.52
TraesCS4B01G305700.1	Wheat	cytosol	78.89	77.06
Zm00001d027996_P001	Maize	cytosol	77.31	71.81
KXG39999	Sorghum	cytosol	77.04	70.36
Os03t0189400-01	Rice	cytosol, plasma membrane	69.39	69.03
Os07t0621800-01	Rice	cytosol	58.58	56.92
PGSC0003DMT400079175	Potato	cytosol	58.05	56.85
AT1G22440.1	Thale cress	cytosol	57.78	56.74
Bra031390.1-P	Field mustard	cytosol	56.2	54.76
CDY21362	Canola	cytosol	56.2	54.62
AT4G22110.2	Thale cress	cytosol	55.94	54.5
CDY00452	Canola	cytosol	55.94	54.36
CDY04816	Canola	cytosol	55.67	54.1
VIT_18s0001g06360.t01	Wine grape	cytosol	55.15	54.01
Solyc04g074540.2.1	Tomato	cytosol	54.62	53.91
CDX91678	Canola	cytosol	55.41	53.85
CDY71245	Canola	cytosol	35.36	52.96
AT1G22430.1	Thale cress	cytosol	53.83	52.58
CDY41481	Canola	cytosol	54.09	52.56
CDX82904	Canola	cytosol	53.83	52.44
CDX79124	Canola	cytosol	48.81	50.96
Solyc04g074530.2.1	Tomato	cytosol, plastid	52.51	50.51
Bra013586.1-P	Field mustard	cytosol	29.55	50.0
Os02t0637700-01	Rice	plastid	47.49	47.24
Os11t0210500-01	Rice	cytosol, plastid	46.97	46.97
Os02t0815500-01	Rice	plasma membrane, plastid	46.97	46.72
Os11t0210300-01	Rice	plasma membrane	46.17	46.17
Os11t0210600-01	Rice	cytosol	35.88	45.79
Os10t0159800-01	Rice	cytosol	45.91	43.18
GSMUA_Achr7P11730_001	Banana	plastid	56.46	33.91
Bra012327.1-P	Field mustard	cytosol	53.03	33.67
Os08t0545200-02	Rice	cytosol, plasma membrane, plastid	23.75	24.39
Os08t0109200-01	Rice	mitochondrion	26.91	23.83
GSMUA_Achr7P11720_001	Banana	mitochondrion, nucleus, plastid	58.31	23.51

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:35.1	EntrezGene:4331894	ProteinID:ABF94388.1	InterPro:ADH_C
InterPro:ADH_N	InterPro:ADH_Zn_CS	EMBL:AK061930	EMBL:AK066331	ProteinID:BAF11137.1	ProteinID:BAS82707.1
ProteinID:EEE58468.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0008270	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf
EnsemblPlantsGene:Os03g0189600	EnsemblPlants:Os03t0189600-01	PFAM:PF00107	PFAM:PF08240	ScanProsite:PS00059	PANTHER:PTHR43880
PANTHER:PTHR43880:SF16	UniProt:Q10QN9	SUPFAM:SSF50129	SUPFAM:SSF51735	UniParc:UPI0000DB489A	RefSeq:XP_015630764.1
RefSeq:XP_015630765.1	RefSeq:XP_015630766.1	SEG:seg	:	:	:

Description

Similar to Alcohol dehydrogenase. (Os03t0189600-01);Similar to Alcohol dehydrogenase. (Os03t0189600-02)

Coordinates

chr3:-:4682354..4685319

Molecular Weight (calculated)

40364.0 Da

IEP (calculated)

4.917

GRAVY (calculated)

0.136

Length

379 amino acids

Sequence
(BLAST)

001: MEDQSLKPIR CKAAVCRAAS EPLIVEEIVV DPPKAYEIRI KIICTSLCHT DVTLWHKVDP AFPRILGHEA YGVVESVGEN VEGLAAGDTV VPTFMGQCDS
101: CASCAAEWTN QCTAVPFTMG PGMRRDGTTR FWDGEGKPLS DTVAVTSFSQ YTVVDVNQVV KVDPAVPPKI ACLLGCCGGT GVGAAWRLAK VQPGSSVVVF
201: GLGSVGLAVV QGAKMCGATK IIGVDLNPNK EEVGKEFGVT DFVNPSQLGD KSVSEVINAM TDGGADYSFE CIGISSVMTE AVRSTKSGRG KTIILGVEKD
301: SQPLCLPSFE FLFGKCVMGS LFGGAKPKTD IPILAEKCMN KELELEKLVT HEVGLTEINT AFDLLLQGKS LRCIIWMDK

Best Arabidopsis Sequence Match ( AT1G22440.1 )
(BLAST)

001: MDKASITEGK PIRCKAAILR KAGEPLVIEE IQVDPPQAYE VRIKILCTSL CHTDVTFWKL DSGPLARFPR ILGHEAVGVV ESIGEKVDGF KQGDVVLPVF
101: HPQCEECKEC ISPKSNWCTK YTNDYLSNTR RYGMTSRFKD SRGEDIHHFI FVSSFTEYTV VDIAHLVKIS PEIPVDIAAL LSCSVATGLG AAWKVADVEE
201: GSTVVIFGLG AVGLAVAEGV RLRGAAKIIG VDLNPAKFEI GKRFGITDFV NPALCGEKTI SEVIREMTDV GADYSFECIG LASLMEEAFK STRPGSGKTI
301: VLGMEQKALP ISLGSYDLLR GRTVCGTLFG GLKPKLDIPI LVDRYLKKEL NLEDLITHEL SFEEINKAFH LLAEGNSIRC IIWMDK

Arabidopsis Description

Alcohol dehydrogenase-like 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SK87]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.