Factsheet for Os08t0109200-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

mitochondrion: 19010998
mitochondrion: 23027867
plasma membrane: 27800704

msms PMID: 23027867 doi

G Liu, H Tian, YQ Huang, J Hu, YX Ji, SQ Li, YQ Feng, L Guo, YG Zhu

State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan 430072, China.

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 19010998 doi

S Huang, NL Taylor, R Narsai, H Eubel, J Whelan, AH Millar

Australian Research Council Centre of Excellence in Plant Energy Biology, M316, University of Western Australia, Crawley, 6009 Western Australia, Australia.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d035032_P003	Maize	mitochondrion	89.02	91.59
KXG24208	Sorghum	mitochondrion	89.95	91.45
Zm00001d049716_P001	Maize	mitochondrion	88.55	90.89
Zm00001d036209_P001	Maize	cytosol	60.51	90.24
TraesCS7D01G319100.1	Wheat	mitochondrion	87.38	90.12
TraesCS7A01G322200.1	Wheat	mitochondrion	87.15	89.88
TraesCS7B01G223100.1	Wheat	mitochondrion	86.92	89.64
GSMUA_Achr5P25890_001	Banana	cytosol	75.47	86.83
HORVU7Hr1G077200.1	Barley	mitochondrion	87.15	84.01
CDX89070	Canola	cytosol	39.02	73.25
VIT_07s0031g03150.t01	Wine grape	mitochondrion	71.26	72.45
Solyc05g056540.2.1	Tomato	plastid	70.79	70.14
PGSC0003DMT400059936	Potato	plastid	70.33	69.68
KRH41009	Soybean	mitochondrion, plastid	67.29	67.45
CDX97482	Canola	cytosol	33.88	67.44
KRH59676	Soybean	mitochondrion	66.82	67.14
AT5G63620.1	Thale cress	mitochondrion	66.36	66.51
CDX81190	Canola	cytosol	17.52	65.79
CDY41524	Canola	mitochondrion	65.89	64.83
CDX84427	Canola	mitochondrion	65.89	64.83
Bra038649.1-P	Field mustard	mitochondrion	65.65	64.6
Bra037749.1-P	Field mustard	cytosol	27.57	63.1
CDY30977	Canola	cytosol	42.29	62.41
Os11t0210600-01	Rice	cytosol	21.03	30.3
Os02t0815500-01	Rice	plasma membrane, plastid	25.93	29.13
Os02t0637700-01	Rice	plastid	25.23	28.35
Os11t0210500-01	Rice	cytosol, plastid	24.77	27.97
Os11t0210300-01	Rice	plasma membrane	24.77	27.97
Os07t0621800-01	Rice	cytosol	25.47	27.95
Os03t0189400-01	Rice	cytosol, plasma membrane	24.53	27.56
Os10t0159800-01	Rice	cytosol	25.93	27.54
Os03t0189600-01	Rice	cytosol, plasma membrane, plastid	23.83	26.91
Os08t0545200-02	Rice	cytosol, plasma membrane, plastid	22.66	26.29

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:35.1	UniProt:A0A0P0XBM6	InterPro:ADH_C	InterPro:ADH_N
ProteinID:BAT03484.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270
GO:GO:0010033	GO:GO:0016491	GO:GO:0050897	GO:GO:0055114	InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf
EnsemblPlantsGene:Os08g0109200	EnsemblPlants:Os08t0109200-01	PFAM:PF00107	PFAM:PF08240	InterPro:PKS_ER	PANTHER:PTHR43350
PANTHER:PTHR43350:SF8	SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735	UniParc:UPI000393888E	SEG:seg

Description

Similar to S-glutathione dehydrogenase/class III alcohol dehydrogenase. (Os08t0109200-01)

Coordinates

chr8:+:458533..461304

Molecular Weight (calculated)

45603.1 Da

IEP (calculated)

8.647

GRAVY (calculated)

0.020

Length

428 amino acids

Sequence
(BLAST)

001: QSKRLSMSIT SASRRAGAAA LPILRRIGGA FRRPFSSEPD PASSPGYHVA GGPSFMRGAV FWEPGRPLTL EDFRMPRPKA GELLIKTKAC GVCHSDLHVL
101: KGELPFSSPC VVGHEITGEV VDHGTHTPAE IINRFPVGSH VVGAFIMPCG NCFYCVKGQE DLCESFFAYN RAKGTLYDGQ TRLFLRSNGK PVYMYSMGGL
201: AEYCVVPANA LAVLPNSLPY TESAILGCAV FTAYGALRHA AEMRAGDSVA VIGVGGVGSS CLQIAKAFGA SEVIAVDVLD EKLQNARTLG ATHTVNAAKE
301: DAVEKIKEIT DGRGVDVAVE ALGKALTFSQ CAKSVRDGGK AVMIGLAATN VMGEVDITRL VRRQVKIIGS YGARARQDLP QIVKLAESGA FNLKNTISRK
401: CKFEEANSAY EDLDRGKIVG RAVVEIMS

Best Arabidopsis Sequence Match ( AT5G63620.1 )
(BLAST)

001: MAFAPILRRA SAVKNLFSLT RLAVGSALST RSLQTGASGD DSQSMGGYHV SPGGFMRGAV YREPNKPLTI EEFHIPRPKS NEILIKTKAC GVCHSDLHVM
101: KGEIPFASPC VIGHEITGEV VEHGPLTDHK IINRFPIGSR VVGAFIMPCG TCSYCAKGHD DLCEDFFAYN RAKGTLYDGE TRLFLRHDDS PVYMYSMGGM
201: AEYCVTPAHG LAPLPESLPY SESAILGCAV FTAYGAMAHA AEIRPGDSIA VIGIGGVGSS CLQIARAFGA SDIIAVDVQD DKLQKAKTLG ATHIVNAAKE
301: DAVERIREIT GGMGVDVAVE ALGKPQTFMQ CTLSVKDGGK AVMIGLSQAG SVGEIDINRL VRRKIKVIGS YGGRARQDLP KVVKLAESGI FNLTNAVSSK
401: YKFEDAGKAF QDLNEGKIVS RGVVEIL

Arabidopsis Description

At5g63620/MBK5_9 [Source:UniProtKB/TrEMBL;Acc:Q93ZM6]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.