CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX89070	Canola	cytosol	52.18	99.56
CDY41524	Canola	mitochondrion	98.62	98.62
AT5G63620.1	Thale cress	mitochondrion	92.87	94.61
CDX97482	Canola	cytosol	43.45	87.91
CDX81190	Canola	cytosol	22.99	87.72
CDY30977	Canola	cytosol	53.1	79.66
GSMUA_Achr5P25890_001	Banana	cytosol	63.91	74.73
KRH41009	Soybean	mitochondrion, plastid	72.87	74.24
VIT_07s0031g03150.t01	Wine grape	mitochondrion	71.49	73.87
KRH59676	Soybean	mitochondrion	72.18	73.71
TraesCS7D01G319100.1	Wheat	mitochondrion	67.59	70.84
Solyc05g056540.2.1	Tomato	plastid	70.34	70.83
TraesCS7B01G223100.1	Wheat	mitochondrion	67.36	70.6
TraesCS7A01G322200.1	Wheat	mitochondrion	67.36	70.6
PGSC0003DMT400059936	Potato	plastid	70.11	70.6
Zm00001d049716_P001	Maize	mitochondrion	67.36	70.26
Zm00001d035032_P003	Maize	mitochondrion	67.13	70.19
Zm00001d036209_P001	Maize	cytosol	46.21	70.03
KXG24208	Sorghum	mitochondrion	67.59	69.83
HORVU7Hr1G077200.1	Barley	mitochondrion	67.36	65.99
Os08t0109200-01	Rice	mitochondrion	64.83	65.89
CDY38887	Canola	cytosol	4.14	31.58
CDY26918	Canola	cytosol	17.01	29.25
CDY32607	Canola	cytosol	10.57	28.57
CDX88342	Canola	cytosol	24.83	28.5
CDX87542	Canola	cytosol	24.83	28.5
CDY00508	Canola	cytosol	22.53	28.32
CDX82904	Canola	cytosol	25.29	28.28
CDX94738	Canola	cytosol	24.37	27.97
CDY00452	Canola	cytosol	25.06	27.95
CDY01241	Canola	cytosol	25.29	27.92
CDX93818	Canola	cytosol	25.29	27.92
CDY22323	Canola	cytosol	24.14	27.7
CDY13136	Canola	cytosol	24.14	27.7
CDY58156	Canola	cytosol	22.99	27.47
CDY36960	Canola	cytosol	23.91	27.44
CDY71245	Canola	cytosol	15.86	27.27
CDX79124	Canola	cytosol	22.76	27.27
CDX68065	Canola	cytosol	23.68	27.18
CDY21362	Canola	cytosol	24.14	26.92
CDY04816	Canola	cytosol	24.14	26.92
CDX79188	Canola	cytosol	23.45	26.91
CDY59757	Canola	cytosol	23.45	26.84
CDY64947	Canola	cytosol	23.91	26.74
CDY13798	Canola	cytosol	23.45	26.7
CDY39423	Canola	cytosol	23.68	26.48
CDX86558	Canola	mitochondrion	8.51	26.43
CDY41481	Canola	cytosol	23.68	26.41
CDX91678	Canola	cytosol	23.68	26.41
CDY05399	Canola	cytosol	22.99	26.32
CDY05455	Canola	cytosol	22.99	26.32
CDX86559	Canola	extracellular	4.14	24.32
CDX73269	Canola	cytosol	19.54	20.58
CDX86557	Canola	cytosol, extracellular	4.6	19.8
CDX73268	Canola	cytosol	1.84	17.78

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:35.1	GO:A0A078D5J5	InterPro:ADH_C	InterPro:ADH_N
EnsemblPlants:CDX84427	ProteinID:CDX84427	ProteinID:CDX84427.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00141633001	InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf
PFAM:PF00107	PFAM:PF08240	InterPro:PKS_ER	PANTHER:PTHR43350	PANTHER:PTHR43350:SF8	SMART:SM00829
SUPFAM:SSF50129	SUPFAM:SSF51735	UniParc:UPI0004EE049F	SEG:seg	:	:

Description

BnaC03g50730D

Coordinates

chrLK031837:-:1129306..1131569

Molecular Weight (calculated)

46377.9 Da

IEP (calculated)

7.498

GRAVY (calculated)

-0.025

Length

435 amino acids

Sequence
(BLAST)

001: MAFAPILRRA SAAKSLFSLS RLSLGSSPSV RSFQTGASGD DRQPPPPPSP SSIAGYHVSS GGYMRGAVYR EPNQPLTIEE FHIPRPKVNE ILIKTKACGV
101: CHSDLHVMKG EIPFSSPCVI GHEITGEVVE HGPLTDHKII QRFPIGSRVV GAFIMPCGTC SYCAKGHDDL CEDFFAFNRA KGTLYDGETR LFLRHDDSPV
201: YMYSMGGMAE YCVTPAHGLA PLPESLPYTE SAILGCAVFT AYGAMAHAAE IRPGDSIAVI GIGGVGSSCL QIARAFGASD IIAVDVQDDK LEKAKTLGAT
301: HTVNAAKEDA VERIREITGG MGVDVAVEAL GRPQTFMQCT LSVKDGGKAV MIGLSQAGSV GEIDINRLVR RKIKVIGSYG GRARQDLPKV VKLAESGIFN
401: LTNAVSSKYK FEDAGKAFQD LNEGKIVSRG VVEIL

Best Arabidopsis Sequence Match ( AT5G63620.1 )
(BLAST)

001: MAFAPILRRA SAVKNLFSLT RLAVGSALST RSLQTGASGD DSQSMGGYHV SPGGFMRGAV YREPNKPLTI EEFHIPRPKS NEILIKTKAC GVCHSDLHVM
101: KGEIPFASPC VIGHEITGEV VEHGPLTDHK IINRFPIGSR VVGAFIMPCG TCSYCAKGHD DLCEDFFAYN RAKGTLYDGE TRLFLRHDDS PVYMYSMGGM
201: AEYCVTPAHG LAPLPESLPY SESAILGCAV FTAYGAMAHA AEIRPGDSIA VIGIGGVGSS CLQIARAFGA SDIIAVDVQD DKLQKAKTLG ATHIVNAAKE
301: DAVERIREIT GGMGVDVAVE ALGKPQTFMQ CTLSVKDGGK AVMIGLSQAG SVGEIDINRL VRRKIKVIGS YGGRARQDLP KVVKLAESGI FNLTNAVSSK
401: YKFEDAGKAF QDLNEGKIVS RGVVEIL

Arabidopsis Description

At5g63620/MBK5_9 [Source:UniProtKB/TrEMBL;Acc:Q93ZM6]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.