CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX97482	Canola	cytosol	61.03	82.33
CDX84427	Canola	mitochondrion	79.66	53.1
AT5G63620.1	Thale cress	mitochondrion	77.93	52.93
CDY41524	Canola	mitochondrion	79.31	52.87
GSMUA_Achr5P25890_001	Banana	cytosol	64.48	50.27
VIT_07s0031g03150.t01	Wine grape	mitochondrion	66.9	46.08
KRH41009	Soybean	mitochondrion, plastid	67.59	45.9
KRH59676	Soybean	mitochondrion	67.24	45.77
PGSC0003DMT400059936	Potato	plastid	67.24	45.14
Solyc05g056540.2.1	Tomato	plastid	66.9	44.91
TraesCS7D01G319100.1	Wheat	mitochondrion	63.45	44.34
Zm00001d035032_P003	Maize	mitochondrion	63.45	44.23
Zm00001d049716_P001	Maize	mitochondrion	63.45	44.12
TraesCS7B01G223100.1	Wheat	mitochondrion	63.1	44.1
TraesCS7A01G322200.1	Wheat	mitochondrion	63.1	44.1
KXG24208	Sorghum	mitochondrion	63.79	43.94
Os08t0109200-01	Rice	mitochondrion	62.41	42.29
HORVU7Hr1G077200.1	Barley	mitochondrion	63.1	41.22
CDX89070	Canola	cytosol	31.38	39.91
Zm00001d036209_P001	Maize	cytosol	39.31	39.72
CDY26918	Canola	cytosol	23.1	26.48
CDY38887	Canola	cytosol	5.17	26.32
CDY32607	Canola	cytosol	13.45	24.22
CDX86559	Canola	extracellular	5.86	22.97
CDY71245	Canola	cytosol	20.0	22.92
CDY00508	Canola	cytosol	24.48	20.52
CDX86558	Canola	mitochondrion	9.66	20.0
CDX87542	Canola	cytosol	25.86	19.79
CDX88342	Canola	cytosol	25.52	19.53
CDY58156	Canola	cytosol	24.48	19.51
CDY01241	Canola	cytosol	26.21	19.29
CDX93818	Canola	cytosol	26.21	19.29
CDX68065	Canola	cytosol	24.48	18.73
CDX79188	Canola	cytosol	24.14	18.47
CDX94738	Canola	cytosol	24.14	18.47
CDY36960	Canola	cytosol	23.79	18.21
CDY22323	Canola	cytosol	23.79	18.21
CDY13136	Canola	cytosol	23.79	18.21
CDY59757	Canola	cytosol	23.79	18.16
CDY05455	Canola	cytosol	23.79	18.16
CDY05399	Canola	cytosol	23.79	18.16
CDY13798	Canola	cytosol	23.79	18.06
CDY41481	Canola	cytosol	23.79	17.69
CDX91678	Canola	cytosol	23.79	17.69
CDY00452	Canola	cytosol	23.1	17.18
CDX82904	Canola	cytosol	22.76	16.97
CDY04816	Canola	cytosol	22.41	16.67
CDY21362	Canola	cytosol	22.41	16.67
CDX73269	Canola	cytosol	23.45	16.46
CDX86557	Canola	cytosol, extracellular	5.52	15.84
CDX79124	Canola	cytosol	19.31	15.43
CDY39423	Canola	cytosol	20.69	15.42
CDY64947	Canola	cytosol	20.69	15.42
CDX81190	Canola	cytosol	5.52	14.04
CDX73268	Canola	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:CDY30977	EnsemblPlantsGene:GSBRNA2T00047006001	Gene3D:3.40.50.720	Gene3D:3.90.180.10	GO:A0A078H0H9	GO:GO:0008150
GO:GO:0008152	GO:GO:0055114	InterPro:ADH_N	InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR43350
PANTHER:PTHR43350:SF8	PFAM:PF08240	ProteinID:CDY30977	ProteinID:CDY30977.1	SEG:seg	SUPFAM:SSF50129
SUPFAM:SSF51735	UniParc:UPI0004EDC80A	UniProt:A0A078H0H9	MapMan:35.1	:	:

Description

BnaC04g24470DBnaC04g24470D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H0H9]

Coordinates

chrLK032265:-:182214..184673

Molecular Weight (calculated)

32075.9 Da

IEP (calculated)

7.020

GRAVY (calculated)

-0.129

Length

290 amino acids

Sequence
(BLAST)

001: MRGAVYREPK QPLTIEEFHI PRPKVNEILI KTKACGVCHS DLHVMKGEIP FSSPCVNGHE ITGEVVEHGP LTDDKIIQRF PIGSRVVGAF IMPCGTCSYC
101: AKGHDDLCED FFAYNRAKGT LYDGETRLFL RHDDSPVYMY SMGGMAEYCV TPAHGLAPLP ESLPYTYGAM AHAAEIRPGD SIAVIGIGGV GSRCLQIART
201: FGASDLIAVD VQDDKLEKAK TLGATSWLEP RLSLKEPIAI KKFNCLSSPK TEMVFPQLPS RDQETASLVI MLQQLQRRRH KEISSLLIIW

Best Arabidopsis Sequence Match ( AT5G63620.1 )
(BLAST)

001: MAFAPILRRA SAVKNLFSLT RLAVGSALST RSLQTGASGD DSQSMGGYHV SPGGFMRGAV YREPNKPLTI EEFHIPRPKS NEILIKTKAC GVCHSDLHVM
101: KGEIPFASPC VIGHEITGEV VEHGPLTDHK IINRFPIGSR VVGAFIMPCG TCSYCAKGHD DLCEDFFAYN RAKGTLYDGE TRLFLRHDDS PVYMYSMGGM
201: AEYCVTPAHG LAPLPESLPY SESAILGCAV FTAYGAMAHA AEIRPGDSIA VIGIGGVGSS CLQIARAFGA SDIIAVDVQD DKLQKAKTLG ATHIVNAAKE
301: DAVERIREIT GGMGVDVAVE ALGKPQTFMQ CTLSVKDGGK AVMIGLSQAG SVGEIDINRL VRRKIKVIGS YGGRARQDLP KVVKLAESGI FNLTNAVSSK
401: YKFEDAGKAF QDLNEGKIVS RGVVEIL

Arabidopsis Description

At5g63620/MBK5_9 [Source:UniProtKB/TrEMBL;Acc:Q93ZM6]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.