Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX87542 | Canola | cytosol | 99.47 | 99.47 |
| AT1G77120.1 | Thale cress | cytosol | 94.72 | 94.72 |
| CDX79188 | Canola | cytosol | 90.24 | 90.24 |
| CDX68065 | Canola | cytosol | 89.97 | 89.97 |
| Solyc04g064710.2.1 | Tomato | cytosol, plastid | 85.22 | 85.22 |
| KRH64550 | Soybean | endoplasmic reticulum | 84.96 | 84.74 |
| PGSC0003DMT400063937 | Potato | cytosol | 84.7 | 84.7 |
| KRH53384 | Soybean | cytosol, endoplasmic reticulum, mitochondrion | 84.43 | 83.99 |
| KRH15944 | Soybean | endoplasmic reticulum | 83.11 | 82.89 |
| GSMUA_Achr11P... | Banana | cytosol | 79.95 | 76.71 |
| KRH16454 | Soybean | cytosol | 73.88 | 75.47 |
| KRH18052 | Soybean | cytosol | 75.2 | 75.2 |
| VIT_18s0001g15450.t01 | Wine grape | mitochondrion | 82.32 | 73.07 |
| CDX94738 | Canola | cytosol | 57.52 | 57.52 |
| CDY22323 | Canola | cytosol | 57.52 | 57.52 |
| CDY36960 | Canola | cytosol | 57.26 | 57.26 |
| CDY13136 | Canola | cytosol | 57.26 | 57.26 |
| CDY05399 | Canola | cytosol | 51.98 | 51.84 |
| CDY05455 | Canola | cytosol | 51.45 | 51.32 |
| CDY59757 | Canola | cytosol | 50.66 | 50.53 |
| CDY26918 | Canola | cytosol | 33.51 | 50.2 |
| CDX91678 | Canola | cytosol | 51.45 | 50.0 |
| CDY13798 | Canola | cytosol | 50.13 | 49.74 |
| CDY04816 | Canola | cytosol | 50.66 | 49.23 |
| CDY41481 | Canola | cytosol | 50.66 | 49.23 |
| CDY71245 | Canola | cytosol | 32.72 | 49.01 |
| CDY21362 | Canola | cytosol | 50.4 | 48.97 |
| CDY39423 | Canola | cytosol | 49.6 | 48.33 |
| CDY01241 | Canola | cytosol | 49.6 | 47.72 |
| CDX93818 | Canola | cytosol | 49.6 | 47.72 |
| CDY64947 | Canola | cytosol | 48.81 | 47.56 |
| CDY00452 | Canola | cytosol | 48.81 | 47.44 |
| CDX82904 | Canola | cytosol | 46.97 | 45.76 |
| CDX79124 | Canola | cytosol | 41.95 | 43.8 |
| CDX73269 | Canola | cytosol | 38.52 | 35.35 |
| CDX89070 | Canola | cytosol | 18.21 | 30.26 |
| CDX86557 | Canola | cytosol, extracellular | 7.92 | 29.7 |
| CDX73268 | Canola | cytosol | 3.43 | 28.89 |
| CDX81190 | Canola | cytosol | 8.44 | 28.07 |
| CDX97482 | Canola | cytosol | 15.3 | 26.98 |
| CDY38887 | Canola | cytosol | 3.96 | 26.32 |
| CDY30977 | Canola | cytosol | 19.53 | 25.52 |
| CDY41524 | Canola | mitochondrion | 28.76 | 25.06 |
| CDX84427 | Canola | mitochondrion | 28.5 | 24.83 |
| CDY00508 | Canola | cytosol | 22.43 | 24.57 |
| CDY58156 | Canola | cytosol | 22.69 | 23.63 |
| CDY32607 | Canola | cytosol | 8.97 | 21.12 |
| CDX86559 | Canola | extracellular | 3.96 | 20.27 |
| CDX86558 | Canola | mitochondrion | 6.86 | 18.57 |
Protein Annotations
| MapMan:3.11.1.2 | Gene3D:3.40.50.720 | Gene3D:3.90.180.10 | GO:A0A078DH93 | InterPro:ADH_C | InterPro:ADH_N |
| InterPro:ADH_Zn_CS | EnsemblPlants:CDX88342 | ProteinID:CDX88342 | ProteinID:CDX88342.1 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004022 | GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 |
| GO:GO:0016491 | GO:GO:0046872 | GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00147859001 | InterPro:GroES-like_sf | InterPro:NAD(P)-bd_dom_sf |
| PFAM:PF00107 | PFAM:PF08240 | ScanProsite:PS00059 | PANTHER:PTHR43880 | PANTHER:PTHR43880:SF9 | SUPFAM:SSF50129 |
| SUPFAM:SSF51735 | UniParc:UPI0004EB2AE4 | SEG:seg | : | : | : |
Description
BnaC06g37860D
Coordinates
chrLK031855:+:459839..461554
Molecular Weight (calculated)
41112.6 Da
IEP (calculated)
6.389
GRAVY (calculated)
-0.098
Length
379 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTTGQIIRC KAAVCWEAGK PLVMEEVEVA PPQKHEVRIK ILFTSLCHTD VYFWEAKGQT PLFPRIFGHE AGGIVESVGE GVTDLQPGDH VLPIFTGECG
101: DCPHCHSEES NMCDLLRINT ERGGMIHDGE SRFSINGKPI HHFLGTSTFS EYTVVHSGQV AKINPEAPLD KVCIVSCGLS TGLGATLNVA KPKKGQSVAI
201: FGLGAVGLAA AEGARIAGAG RIIGVDLNPK RFEEAKKFGV TEFVNPKEHD KPVQQVIAEM TNGGVDRSVE CTGSIQAMIQ AFECVHDGWG VAVLVGVPSK
301: DDAFKTHPMN LLNERTLKGT FFGNYKPKTD IPGVVEKYMN KELELEKFIT HTVPFSEINK AFDYMLKGEG IRCIITMGA
101: DCPHCHSEES NMCDLLRINT ERGGMIHDGE SRFSINGKPI HHFLGTSTFS EYTVVHSGQV AKINPEAPLD KVCIVSCGLS TGLGATLNVA KPKKGQSVAI
201: FGLGAVGLAA AEGARIAGAG RIIGVDLNPK RFEEAKKFGV TEFVNPKEHD KPVQQVIAEM TNGGVDRSVE CTGSIQAMIQ AFECVHDGWG VAVLVGVPSK
301: DDAFKTHPMN LLNERTLKGT FFGNYKPKTD IPGVVEKYMN KELELEKFIT HTVPFSEINK AFDYMLKGEG IRCIITMGA
001: MSTTGQIIRC KAAVAWEAGK PLVIEEVEVA PPQKHEVRIK ILFTSLCHTD VYFWEAKGQT PLFPRIFGHE AGGIVESVGE GVTDLQPGDH VLPIFTGECG
101: ECRHCHSEES NMCDLLRINT ERGGMIHDGE SRFSINGKPI YHFLGTSTFS EYTVVHSGQV AKINPDAPLD KVCIVSCGLS TGLGATLNVA KPKKGQSVAI
201: FGLGAVGLGA AEGARIAGAS RIIGVDFNSK RFDQAKEFGV TECVNPKDHD KPIQQVIAEM TDGGVDRSVE CTGSVQAMIQ AFECVHDGWG VAVLVGVPSK
301: DDAFKTHPMN FLNERTLKGT FFGNYKPKTD IPGVVEKYMN KELELEKFIT HTVPFSEINK AFDYMLKGES IRCIITMGA
101: ECRHCHSEES NMCDLLRINT ERGGMIHDGE SRFSINGKPI YHFLGTSTFS EYTVVHSGQV AKINPDAPLD KVCIVSCGLS TGLGATLNVA KPKKGQSVAI
201: FGLGAVGLGA AEGARIAGAS RIIGVDFNSK RFDQAKEFGV TECVNPKDHD KPIQQVIAEM TDGGVDRSVE CTGSVQAMIQ AFECVHDGWG VAVLVGVPSK
301: DDAFKTHPMN FLNERTLKGT FFGNYKPKTD IPGVVEKYMN KELELEKFIT HTVPFSEINK AFDYMLKGES IRCIITMGA
Arabidopsis Description
ADH1Alcohol dehydrogenase class-P [Source:UniProtKB/Swiss-Prot;Acc:P06525]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.