Factsheet for VIT_18s0001g15450.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
mitochondrion 5
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_04s0044g01130.t01	Wine grape	cytosol	77.52	87.11
VIT_04s0044g01110.t01	Wine grape	cytosol	76.11	85.53
KRH64550	Soybean	endoplasmic reticulum	74.94	84.21
VIT_18s0001g15410.t01	Wine grape	cytosol	74.71	83.95
KRH53384	Soybean	cytosol, endoplasmic reticulum, mitochondrion	74.71	83.73
Solyc04g064710.2.1	Tomato	cytosol, plastid	74.0	83.38
PGSC0003DMT400063937	Potato	cytosol	74.0	83.38
AT1G77120.1	Thale cress	cytosol	73.3	82.59
CDX87542	Canola	cytosol	73.07	82.32
Bra015693.1-P	Field mustard	cytosol	73.07	82.32
CDX88342	Canola	cytosol	73.07	82.32
KRH15944	Soybean	endoplasmic reticulum	71.19	80.0
CDX68065	Canola	cytosol	70.26	79.16
Bra003690.1-P	Field mustard	cytosol	70.02	78.89
CDX79188	Canola	cytosol	69.56	78.36
GSMUA_Achr11P...	Banana	cytosol	71.66	77.47
KRH18052	Soybean	cytosol	66.28	74.67
KRH16454	Soybean	cytosol	63.93	73.58
VIT_07s0005g04610.t01	Wine grape	cytosol	17.56	61.98
VIT_04s0044g01120.t01	Wine grape	cytosol	79.63	57.63
VIT_07s0005g04600.t01	Wine grape	cytosol	31.62	57.2
VIT_16s0039g00320.t01	Wine grape	cytosol	48.01	54.09
VIT_18s0001g06360.t01	Wine grape	cytosol	47.54	52.45
VIT_18s0001g00380.t01	Wine grape	cytosol	44.96	50.13
VIT_18s0001g00410.t01	Wine grape	cytosol	46.14	49.87
VIT_02s0025g02730.t01	Wine grape	cytosol	45.67	49.49
VIT_16s0039g01500.t01	Wine grape	cytosol	17.33	41.57
VIT_06s0004g04330.t01	Wine grape	cytosol	37.94	40.91
VIT_06s0004g04320.t01	Wine grape	mitochondrion, plastid	34.43	39.2
VIT_06s0004g04310.t01	Wine grape	plastid	33.49	37.73
VIT_07s0031g03150.t01	Wine grape	mitochondrion	26.46	26.84
VIT_16s0100g00300.t01	Wine grape	cytosol	22.48	26.3
VIT_16s0100g00290.t01	Wine grape	cytosol, endoplasmic reticulum, plasma membrane	21.55	11.93

Protein Annotations

EntrezGene:100233102	wikigene:100233102	MapMan:3.11.1.2	Gene3D:3.40.50.720	Gene3D:3.90.180.10	ProteinID:AAG01383
ProteinID:AAG01383.1	EntrezGene:ADH3	wikigene:ADH3	InterPro:ADH_C	InterPro:ADH_N	InterPro:ADH_Zn_CS
EMBL:AF194175	EMBL:AM451346	ProteinID:CAN82986	ProteinID:CAN82986.1	ProteinID:CCB46099	ProteinID:CCB46099.1
UniProt:F6H098	EMBL:FN595227	GO:GO:0001666	GO:GO:0003674	GO:GO:0003824	GO:GO:0004022
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005829	GO:GO:0005886	GO:GO:0006950	GO:GO:0006970	GO:GO:0008150	GO:GO:0008152
GO:GO:0008270	GO:GO:0009409	GO:GO:0009413	GO:GO:0009414	GO:GO:0009628	GO:GO:0009651
GO:GO:0009719	GO:GO:0009737	GO:GO:0009744	GO:GO:0009987	GO:GO:0016020	GO:GO:0016491
GO:GO:0031000	GO:GO:0032355	GO:GO:0042542	GO:GO:0042803	GO:GO:0046686	GO:GO:0046872
GO:GO:0055114	GO:GO:1900039	InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF08240
ScanProsite:PS00059	PANTHER:PTHR43880	PANTHER:PTHR43880:SF9	SUPFAM:SSF50129	SUPFAM:SSF51735	UniParc:UPI0001985259
ArrayExpress:VIT_18s0001g15450	EnsemblPlantsGene:VIT_18s0001g15450	EnsemblPlants:VIT_18s0001g15450.t01	unigene:Vvi.79	SEG:seg	:

Description

No Description!

Coordinates

chr18:+:13581959..13584888

Molecular Weight (calculated)

46421.0 Da

IEP (calculated)

8.484

GRAVY (calculated)

-0.108

Length

427 amino acids

Sequence
(BLAST)

001: MMKQNGILVH STGGRSTLPP FFHHKYHPQH LHYSTKRSLR VVKAAMSNTA GQVIKCKAAV SWEAGKPLVI EEVELAPPQA NEVRIKILFT SLCHTDVYFW
101: EAKGQKPAFP RIFGHEAAGV VESVGEGVTD LKPGDTVLPV FTGECKECRH CKSEESNMCD LLRINTDRTV MLSDGKSRFS AKGKPIYHFL GTSTFSEYTV
201: AHVGSVAKIN PAAPLDKVCV LSCGISTGLG AAINVAKPKK GSSVAVFGLG AVGLAAAEGA RISGASRIIG VDLNASRFEQ AKKFGVTEFV NPKDHDKPVQ
301: EVIAEMTDGG VDRSIECTGS VAAMISAFEC VHDGWGVAVL VGVPNRDDSF KTHPINLLNE RTLKGTFFGN FKPRTDLPRL VEKYVNKELD LQLEKFITHE
401: VSFSDINKAF DYMLKGEGLR CIIRMGA

Best Arabidopsis Sequence Match ( AT1G77120.1 )
(BLAST)

001: MSTTGQIIRC KAAVAWEAGK PLVIEEVEVA PPQKHEVRIK ILFTSLCHTD VYFWEAKGQT PLFPRIFGHE AGGIVESVGE GVTDLQPGDH VLPIFTGECG
101: ECRHCHSEES NMCDLLRINT ERGGMIHDGE SRFSINGKPI YHFLGTSTFS EYTVVHSGQV AKINPDAPLD KVCIVSCGLS TGLGATLNVA KPKKGQSVAI
201: FGLGAVGLGA AEGARIAGAS RIIGVDFNSK RFDQAKEFGV TECVNPKDHD KPIQQVIAEM TDGGVDRSVE CTGSVQAMIQ AFECVHDGWG VAVLVGVPSK
301: DDAFKTHPMN FLNERTLKGT FFGNYKPKTD IPGVVEKYMN KELELEKFIT HTVPFSEINK AFDYMLKGES IRCIITMGA

Arabidopsis Description

ADH1Alcohol dehydrogenase class-P [Source:UniProtKB/Swiss-Prot;Acc:P06525]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.