Factsheet for VIT_06s0004g04310.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_06s0004g04320.t01	Wine grape	mitochondrion, plastid	83.11	84.0
VIT_06s0004g04330.t01	Wine grape	cytosol	70.18	67.17
VIT_16s0039g01500.t01	Wine grape	cytosol	31.13	66.29
KRH23995	Soybean	nucleus	51.98	52.39
KRH23989	Soybean	cytosol	51.72	52.27
KRH23996	Soybean	cytosol	51.72	52.27
PGSC0003DMT400038525	Potato	cytosol	51.98	52.25
Solyc03g044200.2.1	Tomato	cytosol	50.4	50.66
KRH23997	Soybean	cytosol	48.28	50.55
PGSC0003DMT400038526	Potato	cytosol	38.26	47.7
PGSC0003DMT400047760	Potato	cytosol	46.97	47.59
PGSC0003DMT400038529	Potato	cytosol	40.11	47.5
Solyc11g071290.1.1	Tomato	cytosol	46.97	47.34
VIT_07s0005g04610.t01	Wine grape	cytosol	14.51	45.45
VIT_04s0044g01110.t01	Wine grape	cytosol	39.05	38.95
VIT_18s0001g15410.t01	Wine grape	cytosol	38.52	38.42
VIT_04s0044g01130.t01	Wine grape	cytosol	38.52	38.42
VIT_18s0001g06360.t01	Wine grape	cytosol	38.79	37.98
VIT_18s0001g00380.t01	Wine grape	cytosol	37.99	37.6
VIT_02s0025g02730.t01	Wine grape	cytosol	37.47	36.04
VIT_16s0039g00320.t01	Wine grape	cytosol	35.36	35.36
VIT_18s0001g00410.t01	Wine grape	cytosol	36.15	34.68
VIT_18s0001g15450.t01	Wine grape	mitochondrion	37.73	33.49
VIT_07s0005g04600.t01	Wine grape	cytosol	20.58	33.05
KRH23988	Soybean	endoplasmic reticulum, extracellular	6.33	26.67
VIT_04s0044g01120.t01	Wine grape	cytosol	38.52	24.75
VIT_07s0031g03150.t01	Wine grape	mitochondrion	24.8	22.33
VIT_16s0100g00300.t01	Wine grape	cytosol	19.0	19.73
VIT_16s0100g00290.t01	Wine grape	cytosol, endoplasmic reticulum, plasma membrane	19.26	9.47

Protein Annotations

EntrezGene:100244971	wikigene:100244971	EntrezGene:100267276	wikigene:100267276	Gene3D:3.40.50.720	Gene3D:3.90.180.10
MapMan:35.1	InterPro:ADH_C	InterPro:ADH_N	InterPro:ADH_Zn_CS	ProteinID:CCB43593	ProteinID:CCB43593.1
UniProt:F6GV34	EMBL:FN594951	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0008270	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	InterPro:GroES-like_sf
EntrezGene:LOC100244971	wikigene:LOC100244971	EntrezGene:LOC100267276	wikigene:LOC100267276	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107
PFAM:PF08240	ScanProsite:PS00059	PANTHER:PTHR43880	PANTHER:PTHR43880:SF19	SUPFAM:SSF50129	SUPFAM:SSF51735
UniParc:UPI0002109CDA	ArrayExpress:VIT_06s0004g04310	EnsemblPlantsGene:VIT_06s0004g04310	EnsemblPlants:VIT_06s0004g04310.t01	RefSeq:XP_002281275	RefSeq:XP_002281275.2
RefSeq:XP_003632151	RefSeq:XP_003632151.1	:	:	:	:

Description

No Description!

Coordinates

chr6:+:5282932..5294571

Molecular Weight (calculated)

41303.4 Da

IEP (calculated)

8.678

GRAVY (calculated)

-0.058

Length

379 amino acids

Sequence
(BLAST)

001: MKMHIRSILS SYLTRKPISK SPIFRSLGQN HFFTSSTSRS NQVITCKAAV CWGAGEAVKV EEIQVEPPKS SEVRVKMMYA SICHTDILCC SGFPLPLFPK
101: VPGHEGVGMM ESVGENVIAL KEGDLVIPTY LGECGECENC KSGKTNLCLE HPLTLNGLML DGTSRMSIRG QRLYHLFSCS TWAEYMVVNA NYLVKIDSRI
201: ALSEASFLSC GFSTGYGAAW KAAKVEKGSS VLEGARNQGA ARIIGIDKNE RRCEMGKNFG MTDFINPSKS NKPISELVRE LTRGEGVDYS FECSGIQSLI
301: NEVLQPTKVG KGMLIVIGAG NNASMDINFL TLLLGRTIKG CIFGGIKVQS DIPLLVNKCI NKVIEGAQNQ GAARIHRQK

Best Arabidopsis Sequence Match ( AT1G22430.1 )
(BLAST)

001: MDKTFFSSNE GKPITCKAAI CRKAGEALVI EDIHVDPPQA YEVRIKILCT SLCHTDLTFW KLSFGPISRF PRILGHEAVG VVESIGENVD GFKQGDVVLP
101: VFHPYCEECK DCKSSKTNWC DRYAEDFISN TRRYGMASRF KDSSGEVIHH FLFVSSFSEY TVVDIAHLVK ISPEIPVDKA ALLSCGVSTG IGAAWKVANV
201: EEGSTIAIFG LGAVGLAVAE GARLRGAAKI IGIDTNSDKF ELGKKFGFTD FINPTLCGEK KISEVIKEMT EGGVDYSFEC VGLASLLNEA FISTRTGTGK
301: TVMLGMEKHA APISLGSFDL LRGRVICGSL FGGLKSKLDI PILVDHYLKK ELNLDSFITH ELNFKEINKA FALLEEGKSL RCILWMDK

Arabidopsis Description

Alcohol dehydrogenase-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SK86]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.