Factsheet for VIT_18s0001g06360.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400079175	Potato	cytosol	68.73	68.73
CDY71245	Canola	cytosol	44.19	67.59
Solyc04g074540.2.1	Tomato	cytosol	66.93	67.45
VIT_18s0001g00380.t01	Wine grape	cytosol	66.41	67.1
KXG40001	Sorghum	cytosol	65.89	66.93
CDY00452	Canola	cytosol	67.44	66.92
AT1G22430.1	Thale cress	cytosol	66.67	66.49
Os03t0189400-01	Rice	cytosol, plasma membrane	65.37	66.4
Bra013586.1-P	Field mustard	cytosol	38.24	66.07
AT4G22110.2	Thale cress	cytosol	65.63	65.3
CDX91678	Canola	cytosol	65.63	65.13
AT1G22440.1	Thale cress	cytosol	64.86	65.03
Bra031390.1-P	Field mustard	cytosol	65.12	64.78
CDY21362	Canola	cytosol	65.12	64.62
CDY41481	Canola	cytosol	64.86	64.36
TraesCS4D01G303800.1	Wheat	cytosol	63.31	64.14
CDY04816	Canola	cytosol	64.34	63.85
Os07t0621800-01	Rice	cytosol	62.79	62.31
Zm00001d027995_P001	Maize	cytosol, extracellular	60.47	62.23
Solyc04g074530.2.1	Tomato	cytosol, plastid	63.05	61.93
TraesCS2B01G189800.1	Wheat	peroxisome	64.86	61.82
CDX82904	Canola	cytosol	62.02	61.7
TraesCS4B01G305600.1	Wheat	cytosol	65.12	61.46
KXG36722	Sorghum	cytosol	63.05	61.15
VIT_18s0001g00410.t01	Wine grape	cytosol	62.27	61.01
TraesCS2B01G189700.1	Wheat	peroxisome	61.5	60.71
CDX79124	Canola	cytosol	56.59	60.33
TraesCS2D01G170900.1	Wheat	cytosol	64.6	60.1
TraesCS2D01G170800.1	Wheat	cytosol	59.43	59.9
KXG36724	Sorghum	cytosol	55.56	59.39
HORVU4Hr1G078460.7	Barley	cytosol	58.14	57.99
TraesCS4D01G303900.1	Wheat	cytosol	57.62	57.62
TraesCS4A01G406200.1	Wheat	golgi	57.62	57.47
TraesCS4B01G305700.1	Wheat	cytosol	57.62	57.47
TraesCS2A01G163900.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	63.31	56.58
TraesCS4A01G406100.2	Wheat	cytosol	57.36	56.06
HORVU2Hr1G029960.2	Barley	mitochondrion	39.79	55.6
Os03t0189600-01	Rice	cytosol, plasma membrane, plastid	54.01	55.15
Zm00001d027996_P001	Maize	cytosol	57.36	54.41
HORVU3Hr1G044960.1	Barley	cytosol, plastid	15.25	53.64
KXG39999	Sorghum	cytosol	57.36	53.49
VIT_18s0001g15410.t01	Wine grape	cytosol	52.45	53.42
VIT_07s0005g04610.t01	Wine grape	cytosol	16.54	52.89
VIT_16s0039g00320.t01	Wine grape	cytosol	51.42	52.51
VIT_04s0044g01130.t01	Wine grape	cytosol	51.42	52.37
VIT_04s0044g01110.t01	Wine grape	cytosol	50.39	51.32
VIT_02s0025g02730.t01	Wine grape	cytosol	48.84	47.97
VIT_07s0005g04600.t01	Wine grape	cytosol	29.2	47.88
VIT_18s0001g15450.t01	Wine grape	mitochondrion	52.45	47.54
VIT_16s0039g01500.t01	Wine grape	cytosol	20.41	44.38
VIT_06s0004g04330.t01	Wine grape	cytosol	43.41	42.42
Bra012327.1-P	Field mustard	cytosol	65.12	42.21
VIT_06s0004g04320.t01	Wine grape	mitochondrion, plastid	39.28	40.53
VIT_06s0004g04310.t01	Wine grape	plastid	37.98	38.79
GSMUA_Achr7P11730_001	Banana	plastid	61.5	37.72
VIT_04s0044g01120.t01	Wine grape	cytosol	51.16	33.56
VIT_07s0031g03150.t01	Wine grape	mitochondrion	28.17	25.89
GSMUA_Achr7P11720_001	Banana	mitochondrion, nucleus, plastid	62.27	25.64
VIT_16s0100g00300.t01	Wine grape	cytosol	20.67	21.92
VIT_16s0100g00290.t01	Wine grape	cytosol, endoplasmic reticulum, plasma membrane	20.67	10.38

Protein Annotations

EntrezGene:100245520	wikigene:100245520	Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:35.1	InterPro:ADH_C
InterPro:ADH_N	InterPro:ADH_Zn_CS	ProteinID:CBI19197	ProteinID:CBI19197.3	UniProt:E0CRP3	EMBL:FN595227
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270
GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	InterPro:GroES-like_sf	EntrezGene:LOC100245520	wikigene:LOC100245520
InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF08240	ScanProsite:PS00059	PANTHER:PTHR43880	PANTHER:PTHR43880:SF10
SUPFAM:SSF50129	SUPFAM:SSF51735	TIGR:TC66682	UniParc:UPI00015C7D83	ArrayExpress:VIT_18s0001g06360	EnsemblPlantsGene:VIT_18s0001g06360
EnsemblPlants:VIT_18s0001g06360.t01	unigene:Vvi.13923	RefSeq:XP_002285748	RefSeq:XP_002285748.2	RefSeq:XP_010664347.1	SEG:seg

Description

No Description!

Coordinates

chr18:+:4760150..4762878

Molecular Weight (calculated)

42294.1 Da

IEP (calculated)

6.192

GRAVY (calculated)

-0.042

Length

387 amino acids

Sequence
(BLAST)

001: MEKKNSSETA GKAITCKAAI CKEPGEALVI EEIEVAPPEA WEIRIKILCT SLCHTDVTFW KMNDGPERSF PKILGHEAVG VVESVGEHVE EVKEGDLVVP
101: VFLPSCKECR DCTSTKSNLC TKFGSKFYQG MPRDGSSRFR NMKGEVVHHF LFVSSFVEYT VVDIAHVVRL NHEIPADKAC LLSCGVSTGI GAAWKVAEVE
201: EGSTVAIFGL GAVGLAVAEG ARLRGASKII GVDLNPEKFE IGKKFGVTHF INPTACGEKA VSQVVKEMTD GGADYCFECI GLASLMKDAF DCSREGWGKT
301: VILGVEMHGS DLNVNSSQIL RGRSVMGSLF GGLKPKSDIP ILAKKYIDKE LRLDEFITHE VNFQDINKAF EFQSQGKSIR CIIWMDK

Best Arabidopsis Sequence Match ( AT1G22430.2 )
(BLAST)

001: MDKTFFSSNE GKPITCKAAI CRKAGEALVI EDIHVDPPQA YEVRIKILCT SLCHTDLTFW KLSFGPISRF PRILGHEAVG VVESIGENVD GFKQGDVVLP
101: VFHPYCEECK DCKSSKTNWC DRYAEDFISN TRRYGMASRF KDSSGEVIHH FLFVSSFSEY TVVDIAHLVK ISPEIPVDKA ALLSCGVSTG IGAAWKVANV
201: EEGSTIAIFG LGAVGLAVAE GARLRGAAKI IGIDTNSDKF ELGKKFGFTD FINPTLCGEK KISEVIKEMT EGGVDYSFEC VGLASLLNEA FISTRTGTGK
301: TVMLGMEKHA APISLGSFDL LRGRVICGSL FGGLKSKLDI PILVDHYLKK ELNLDSFITH ELNFKEINKA FALLEEGKSL RCILWMDK

Arabidopsis Description

Alcohol dehydrogenase-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SK86]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.