Factsheet for Zm00001d027995_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

extracellular: 20408568

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG40001	Sorghum	cytosol	87.23	86.09
TraesCS4D01G303800.1	Wheat	cytosol	81.38	80.1
Os03t0189400-01	Rice	cytosol, plasma membrane	80.32	79.27
TraesCS4B01G305600.1	Wheat	cytosol	83.78	76.83
TraesCS4A01G406100.2	Wheat	cytosol	72.07	68.43
VIT_18s0001g06360.t01	Wine grape	cytosol	62.23	60.47
Solyc04g074540.2.1	Tomato	cytosol	61.7	60.42
PGSC0003DMT400079175	Potato	cytosol	61.17	59.43
Zm00001d027996_P001	Maize	cytosol	63.56	58.58
Bra013586.1-P	Field mustard	cytosol	32.18	54.02
AT1G22440.1	Thale cress	cytosol	55.32	53.89
CDY00452	Canola	cytosol	55.85	53.85
AT1G22430.1	Thale cress	cytosol	55.05	53.35
Solyc04g074530.2.1	Tomato	cytosol, plastid	55.85	53.3
Bra031390.1-P	Field mustard	cytosol	54.79	52.96
CDY21362	Canola	cytosol	54.79	52.82
CDX91678	Canola	cytosol	54.52	52.56
AT4G22110.2	Thale cress	cytosol	54.26	52.44
CDY04816	Canola	cytosol	53.99	52.05
HORVU3Hr1G044960.1	Barley	cytosol, plastid	15.16	51.82
CDY41481	Canola	cytosol	53.46	51.54
CDY71245	Canola	cytosol	34.31	50.99
CDX82904	Canola	cytosol	51.86	50.13
CDX79124	Canola	cytosol	46.81	48.48
Zm00001d049059_P001	Maize	cytosol, extracellular	48.67	48.28
Zm00001d033931_P002	Maize	cytosol, extracellular, plasma membrane	47.87	47.49
Zm00001d051227_P001	Maize	extracellular	47.34	46.35
Zm00001d030347_P001	Maize	vacuole	45.21	40.67
Zm00001d030348_P001	Maize	cytosol	42.29	37.32
GSMUA_Achr7P11730_001	Banana	plastid	61.17	36.45
Bra012327.1-P	Field mustard	cytosol	53.72	33.84
Zm00001d018468_P001	Maize	plastid	39.36	28.41
Zm00001d035032_P003	Maize	mitochondrion	28.72	25.96
Zm00001d036209_P001	Maize	cytosol	19.68	25.78
Zm00001d049716_P001	Maize	mitochondrion	28.46	25.66
GSMUA_Achr7P11720_001	Banana	mitochondrion, nucleus, plastid	61.7	24.68
Zm00001d031727_P004	Maize	cytosol, extracellular, plastid	21.81	22.4

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:35.1	UniProt:A0A1D6JR64	InterPro:ADH_C	InterPro:ADH_N
InterPro:ADH_Zn_CS	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0008270	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf
ProteinID:ONL94445.1	PFAM:PF00107	PFAM:PF08240	ScanProsite:PS00059	PANTHER:PTHR43880	PANTHER:PTHR43880:SF10
SUPFAM:SSF50129	SUPFAM:SSF51735	UniParc:UPI000844C871	EnsemblPlantsGene:Zm00001d027995	EnsemblPlants:Zm00001d027995_P001	EnsemblPlants:Zm00001d027995_T001

Description

Alcohol dehydrogenase-like 2

Coordinates

chr1:-:19655485..19665448

Molecular Weight (calculated)

40692.2 Da

IEP (calculated)

6.632

GRAVY (calculated)

-0.024

Length

376 amino acids

Sequence
(BLAST)

001: MENQGPKPIR CKAAVCRAAG EPLAIEEVVV DTPKAHEVRI RIICTSLCHS DVTFWRMKDL PDNIPRIFGH EAFGVVESVG EQVDEFAAGD AVVPTFLGQC
101: SECVDCRSAR SNMCSKYRFA VRPGMPRDGT TRFTDGQGRP LHHFFGVSSF AEYTVVDVNQ VVKLNPAVPP ALACLLSCGA STGVGAAWKQ AKVEPGSSVA
201: IFGLGAVGLA VNHSEVTSPD AFRPLPLPAG KKFGVTHFIN PKELGEEKPV HQAIAEMTDG GADYCFECIG LAALMNDAFR SSRDGWGKTI ILGVEMHGAP
301: LCISPHEILH GKSVIGSMFG GVKPKQDIPI LADKYMNKEL ELDKFITHEV GLKDINQAFD LLLQGKSLRC TIWMDK

Best Arabidopsis Sequence Match ( AT5G42250.1 )
(BLAST)

001: MENGNSSSDN KSSHKPIRCK AAVSRKAGEP LVMEEIMVAP PQPFEVRIRI ICTALCHSDV TFWKLQVPPA CFPRILGHEA IGVVESVGEN VKEVVEGDTV
101: LPTFMPDCGD CVDCKSHKSN LCSKFPFKVS PWMPRYDNSS RFTDLNGETL FHFLNVSSFS EYTVLDVANV VKIDSSIPPS RACLLSCGVS TGVGAAWETA
201: KVEKGSTVVI FGLGSIGLAV AEGARLCGAS RIIGVDINPT KFQVGQKFGV TEFVNSMTCE KNRVSEVINE MTDGGADYCF ECVGSSSLVQ EAYACCRQGW
301: GKTITLGVDK PGSQICLDSF DVLHHGKILM GSLFGGLKAK THIPILLKRY LSNELELDKF VTHEMKFEEI NDAFQLLLEG KCIRCVLWMG

Arabidopsis Description

Alcohol dehydrogenase-like 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FH04]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.