Factsheet for Zm00001d031727_P004

Subcellular Localization

min:

: max

Winner_takes_all: plastid, extracellular, cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular, plastid
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

extracellular: 20408568
plastid: 22065420

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES15252	Sorghum	cytosol	92.35	90.86
Os08t0545200-02	Rice	cytosol, plasma membrane, plastid	88.52	87.8
TraesCS7D01G269800.1	Wheat	cytosol	84.43	84.66
TraesCS7B01G167500.1	Wheat	cytosol	84.43	84.66
TraesCS7A01G269300.1	Wheat	cytosol	84.43	84.66
GSMUA_Achr4P19640_001	Banana	cytosol	79.51	79.95
CDY00508	Canola	cytosol	74.32	78.61
PGSC0003DMT400081907	Potato	cytosol	74.32	78.61
Solyc01g006510.2.1	Tomato	cytosol, extracellular, nucleus, plastid	76.23	78.59
Bra028288.1-P	Field mustard	cytosol	73.77	78.03
AT5G51970.1	Thale cress	cytosol	76.78	77.2
KRH09146	Soybean	cytosol, nucleus	76.5	76.92
CDY58156	Canola	cytosol	76.5	76.92
VIT_16s0100g00300.t01	Wine grape	cytosol	76.23	76.44
HORVU7Hr1G056770.2	Barley	cytosol	84.43	74.82
GSMUA_Achr4P19630_001	Banana	cytosol	30.6	72.73
GSMUA_Achr4P19620_001	Banana	cytosol	35.25	72.47
PGSC0003DMT400065063	Potato	cytosol	65.57	67.61
KRH38627	Soybean	cytosol	76.23	60.52
Solyc06g035680.1.1	Tomato	cytosol	27.6	56.74
VIT_16s0100g00290.t01	Wine grape	cytosol, endoplasmic reticulum, plasma membrane	70.22	33.33
Zm00001d036209_P001	Maize	cytosol	19.95	25.44
Zm00001d035032_P003	Maize	mitochondrion	27.6	24.28
Zm00001d049716_P001	Maize	mitochondrion	27.32	23.98
Zm00001d033931_P002	Maize	cytosol, extracellular, plasma membrane	24.04	23.22
Zm00001d049059_P001	Maize	cytosol, extracellular	23.5	22.69
Zm00001d051227_P001	Maize	extracellular	23.22	22.14
Zm00001d027995_P001	Maize	cytosol, extracellular	22.4	21.81
Zm00001d030347_P001	Maize	vacuole	24.86	21.77
Zm00001d030348_P001	Maize	cytosol	25.14	21.6
Zm00001d027996_P001	Maize	cytosol	23.77	21.32
Zm00001d018468_P001	Maize	plastid	21.31	14.97

Protein Annotations

EntrezGene:100283066	Gene3D:3.40.50.720	MapMan:3.5.2	Gene3D:3.90.180.10	UniProt:A0A1D6KL30	InterPro:ADH_C
InterPro:ADH_N	InterPro:ADH_Zn_CS	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0008270	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	InterPro:GroES-like_sf
InterPro:NAD(P)-bd_dom_sf	ProteinID:ONM03597.1	PFAM:PF00107	PFAM:PF08240	InterPro:PKS_ER	ScanProsite:PS00059
PANTHER:PTHR43161	PANTHER:PTHR43161:SF8	SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735	UniParc:UPI000220BD92
EnsemblPlantsGene:Zm00001d031727	EnsemblPlants:Zm00001d031727_P004	EnsemblPlants:Zm00001d031727_T004	SEG:seg	:	:

Description

sorbitol dehydrogenase homolog1Sorbitol dehydrogenase

Coordinates

chr1:+:199715758..199718643

Molecular Weight (calculated)

39044.5 Da

IEP (calculated)

6.722

GRAVY (calculated)

0.146

Length

366 amino acids

Sequence
(BLAST)

001: MGKGAQGSDA AAAGGEVEEN MAAWLVAKNT LKIMPFKLPP VGPYDVRVRM KAVGICGSDV HYLREMRIAH FVVKEPMVIG HECAGVVEEV GAGVMHLSVG
101: DRVALEPGVS CWRCRHCKGG RYNLCEDMKF FATPPVHGSL ANQVVHPADL CFKLPDGVSL EEGAMCEPLS VGVHACRRAG VGPETGVLVV GAGPIGLVSL
201: LAARAFGAPR VVVVDVDDHR LAVARSLGAD AAVRVSPRVE DLADEVERIR AAMGSDIDVS LDCAGFSKTM STALESTRPG GKVCLVGMGH NEMTLPLTAA
301: AAREVDVVGV FRYKDTWPLC IDFLRSGKVD VKPLITHRFG FSQRDVEEAF EVSARGRDAI KVMFNL

Best Arabidopsis Sequence Match ( AT5G51970.1 )
(BLAST)

001: MGKGGMSQGE GSKVEEENMA AWLVGINTLK IQPFLLPSVG PHDVRVRMKA VGICGSDVHY LKTMRCADFV VKEPMVIGHE CAGIIEEVGE EVKHLVVGDR
101: VALEPGISCW RCNLCREGRY NLCPEMKFFA TPPVHGSLAN QVVHPADLCF KLPENVSLEE GAMCEPLSVG VHACRRAEVG PETNVLVMGA GPIGLVTMLA
201: ARAFSVPRIV IVDVDENRLA VAKQLGADEI VQVTTNLEDV GSEVEQIQKA MGSNIDVTFD CAGFNKTMST ALAATRCGGK VCLVGMGHGI MTVPLTPAAA
301: REVDVVGVFR YKNTWPLCLE FLTSGKIDVK PLITHRFGFS QKEVEDAFET SARGSNAIKV MFNL

Arabidopsis Description

SDHSorbitol dehydrogenase [Source:UniProtKB/Swiss-Prot;Acc:Q9FJ95]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.