Factsheet for Solyc06g035680.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1
extracellular 1
golgi 1
plasma membrane 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400065063	Potato	cytosol	84.83	42.54
Solyc01g006510.2.1	Tomato	cytosol, extracellular, nucleus, plastid	62.92	31.55
TraesCS7D01G269800.1	Wheat	cytosol	58.43	28.49
TraesCS7B01G167500.1	Wheat	cytosol	58.43	28.49
TraesCS7A01G269300.1	Wheat	cytosol	58.43	28.49
Os08t0545200-02	Rice	cytosol, plasma membrane, plastid	58.43	28.18
EES15252	Sorghum	cytosol	57.87	27.69
Zm00001d031727_P004	Maize	cytosol, extracellular, plastid	56.74	27.6
HORVU7Hr1G056770.2	Barley	cytosol	58.43	25.18
GSMUA_Achr4P19620_001	Banana	cytosol	23.6	23.6
VIT_16s0100g00290.t01	Wine grape	cytosol, endoplasmic reticulum, plasma membrane	62.92	14.53
Solyc06g072160.2.1	Tomato	cytosol	26.97	12.18
Solyc04g064710.2.1	Tomato	cytosol, plastid	25.84	12.14
Solyc04g082170.2.1	Tomato	cytosol	26.4	12.08
Solyc12g094500.1.1	Tomato	cytosol	25.84	11.83
Solyc04g082180.2.1	Tomato	cytosol	25.84	11.79
Solyc09g064370.2.1	Tomato	nucleus	24.72	11.52
Solyc11g071290.1.1	Tomato	cytosol	23.03	10.9
Solyc08g083280.2.1	Tomato	cytosol	23.03	10.76
Solyc03g044200.2.1	Tomato	cytosol	22.47	10.61
Solyc05g056540.2.1	Tomato	plastid	24.72	10.19
Solyc06g059740.2.1	Tomato	plastid	21.91	10.16
Solyc04g074540.2.1	Tomato	cytosol	21.91	10.16
Solyc04g074530.2.1	Tomato	cytosol, plastid	20.22	9.14

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:35.1	InterPro:ADH_C	InterPro:ADH_N	InterPro:ADH_Zn_CS
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152
GO:GO:0008270	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114
InterPro:GroES-like_sf	UniProt:K4C4U0	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF08240	ScanProsite:PS00059
PANTHER:PTHR43161	PANTHER:PTHR43161:SF8	SUPFAM:SSF50129	SUPFAM:SSF51735	EnsemblPlantsGene:Solyc06g035680.1	EnsemblPlants:Solyc06g035680.1.1
TMHMM:TMhelix	UniParc:UPI0002765D53	:	:	:	:

Description

No Description!

Coordinates

chr6:+:24707439..24708331

Molecular Weight (calculated)

19170.1 Da

IEP (calculated)

6.887

GRAVY (calculated)

0.535

Length

178 amino acids

Sequence
(BLAST)

001: MAIQNMRVAN FVVKKPMVLG HECAGIVEQV GSQVKFLMIG DRVALEPGIS CRKVQCVKPL SVGVHACHRA NVGPDTKLII IGAVPIGLLT ILAAHAFGSP
101: QIVIIDVDDC CLSFAKEMGA DEIIKVSSIV QDVEEEVVRI RNAMGGPVDL SFDCVGFNKT MTRLLKPPML VVMYALLD

Best Arabidopsis Sequence Match ( AT5G51970.1 )
(BLAST)

001: MGKGGMSQGE GSKVEEENMA AWLVGINTLK IQPFLLPSVG PHDVRVRMKA VGICGSDVHY LKTMRCADFV VKEPMVIGHE CAGIIEEVGE EVKHLVVGDR
101: VALEPGISCW RCNLCREGRY NLCPEMKFFA TPPVHGSLAN QVVHPADLCF KLPENVSLEE GAMCEPLSVG VHACRRAEVG PETNVLVMGA GPIGLVTMLA
201: ARAFSVPRIV IVDVDENRLA VAKQLGADEI VQVTTNLEDV GSEVEQIQKA MGSNIDVTFD CAGFNKTMST ALAATRCGGK VCLVGMGHGI MTVPLTPAAA
301: REVDVVGVFR YKNTWPLCLE FLTSGKIDVK PLITHRFGFS QKEVEDAFET SARGSNAIKV MFNL

Arabidopsis Description

SDHSorbitol dehydrogenase [Source:UniProtKB/Swiss-Prot;Acc:Q9FJ95]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.