Factsheet for Solyc06g059740.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

plastid: 20363867
extracellular: 22364583
plastid: 22908117
nucleus: 25464976
plastid: 26371478
extracellular: 29876421

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

msms PMID: 20363867 doi

C Barsan, P Sanchez-Bel, C Rombaldi, I Egea, M Rossignol, M Kuntz, M Zouine, A Latché, M Bouzayen, JC Pech

Université de Toulouse, INP-ENSA Toulouse, Génomique et Biotechnologie des Fruits, Avenue de l'Agrobiopole BP 32607, F-31326 Castanet-Tolosan, France.

msms PMID: 29876421 doi

L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán

Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.

msms PMID: 26371478 doi

M Suzuki, S Takahashi, T Kondo, H Dohra, Y Ito, Y Kiriiwa, M Hayashi, S Kamiya, M Kato, M Fujiwara, Y Fukao, M Kobayashi, N Nagata, R Motohashi

Faculty of Agriculture, Shizuoka University, Shizuoka city, Shizuoka, Japan., Faculty of Science, Japan Woman's University, Bunkyo-ku, Tokyo, Japan., Instrumental Research Support Office, Research Institute of Green Science and Technology, Shizuoka University, Shizuoka city, Shizuoka, Japan., The Plant Science Education Unit, Nara Institute of Science and Technology, Ikoma city, Nara, Japan.

msms PMID: 22364583 doi

P Shah, AL Powell, R Orlando, C Bergmann, G Gutierrez-Sanchez

Complex Carbohydrate Research Center, University of Georgia, Athens, Georgia, United States.

msms PMID: 25464976 doi

Y Wang, W Wang, J Cai, Y Zhang, G Qin, S Tian

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400079071	Potato	cytosol	93.23	94.21
KXG28254	Sorghum	cytosol	60.16	86.19
KRH64058	Soybean	cytosol, endoplasmic reticulum	83.07	83.73
VIT_18s0001g15410.t01	Wine grape	cytosol	82.03	82.89
Zm00001d033931_P002	Maize	cytosol, extracellular, plasma membrane	81.77	82.85
TraesCS4B01G106300.1	Wheat	cytosol, golgi	81.51	82.59
GSMUA_Achr6P18590_001	Banana	cytosol	81.51	82.37
Os11t0210300-01	Rice	plasma membrane	81.25	82.32
TraesCS4D01G103000.1	Wheat	golgi	81.25	82.32
TraesCS4A01G202100.2	Wheat	cytosol	81.25	82.32
KXG37606	Sorghum	cytosol	80.99	82.06
Solyc04g064710.2.1	Tomato	cytosol, plastid	80.73	81.79
TraesCS1D01G376300.1	Wheat	cytosol, golgi	80.47	81.53
TraesCS1B01G389200.1	Wheat	cytosol	80.21	81.27
TraesCS1A01G370100.1	Wheat	cytosol	79.95	80.79
TraesCS4B01G106500.1	Wheat	cytosol	79.17	80.21
Zm00001d049059_P001	Maize	cytosol, extracellular	78.91	79.95
TraesCS4A01G202300.1	Wheat	cytosol	78.91	79.95
Os11t0210600-01	Rice	cytosol	61.72	79.8
TraesCS4B01G106400.1	Wheat	cytosol	78.12	79.79
TraesCS4A01G202200.1	Wheat	cytosol	78.65	79.68
TraesCS4D01G103100.1	Wheat	cytosol	78.65	79.68
EES08380	Sorghum	cytosol	78.65	79.68
TraesCS4D01G103300.1	Wheat	cytosol	71.61	79.25
TraesCS5D01G196300.2	Wheat	cytosol	78.12	79.16
TraesCS1A01G370200.1	Wheat	cytosol	77.86	79.1
TraesCS5B01G189200.1	Wheat	cytosol	77.6	78.63
TraesCS5A01G193900.1	Wheat	cytosol	75.26	78.53
Os11t0210500-01	Rice	cytosol, plastid	77.08	78.1
HORVU5Hr1G057090.5	Barley	cytosol	60.16	60.79
Solyc09g064370.2.1	Tomato	nucleus	56.25	56.54
Solyc06g072160.2.1	Tomato	cytosol	50.52	49.24
Solyc04g082170.2.1	Tomato	cytosol	49.74	49.1
Solyc04g082180.2.1	Tomato	cytosol	49.74	48.97
Solyc12g094500.1.1	Tomato	cytosol	49.48	48.84
Solyc08g083280.2.1	Tomato	cytosol	47.66	48.03
Solyc04g074540.2.1	Tomato	cytosol	47.14	47.14
Solyc04g074530.2.1	Tomato	cytosol, plastid	43.23	42.13
Solyc03g044200.2.1	Tomato	cytosol	40.36	41.11
Solyc11g071290.1.1	Tomato	cytosol	37.5	38.3
CDX73268	Canola	cytosol	4.17	35.56
Solyc01g006510.2.1	Tomato	cytosol, extracellular, nucleus, plastid	21.61	23.38
Solyc05g056540.2.1	Tomato	plastid	26.3	23.38
Solyc06g035680.1.1	Tomato	cytosol	10.16	21.91

Protein Annotations

MapMan:3.11.1.2	Gene3D:3.40.50.720	Gene3D:3.90.180.10	InterPro:ADH_C	InterPro:ADH_N	GO:GO:0003674
GO:GO:0003824	GO:GO:0004022	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0016491	GO:GO:0046872
GO:GO:0055114	InterPro:GroES-like_sf	UniProt:K4C6G1	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF08240
PANTHER:PTHR43880	PANTHER:PTHR43880:SF22	SUPFAM:SSF50129	SUPFAM:SSF51735	EnsemblPlantsGene:Solyc06g059740.2	EnsemblPlants:Solyc06g059740.2.1
UniParc:UPI0002765D7C	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr6:+:37606747..37608946

Molecular Weight (calculated)

41756.7 Da

IEP (calculated)

6.343

GRAVY (calculated)

0.082

Length

384 amino acids

Sequence
(BLAST)

001: MSTTVGQVIR CKAAVAWEAG KPLVMEEVDV APPQKMEVRL KILYTSLCHT DVYFWEAKCC QVKIQSFLEF LDMKQQGMIV ESVGEGVTDL APGDHVLPVF
101: TGECKDCAHC KSEESNMCSL LRINTDRGVM LNDGKSRFSI NGNPIYHFVG TSTFSEYTVV HVGCVAKINP LAPLDKVCVL SCGISTGLGA SLNVAKPTKG
201: SSVAIFGLGA VGLAAAEGAR IAGASRIIGV DLNASRFEQA KKFGVTEFVN PKDYSKPVQE VIAEMTDGGV DRSVECTGHI DAMISAFECV HDGWGVAVLV
301: GVPHKEAVFK THPLNFLNER TLKGTFFGNY KPRSDIPCVV EKYMNKELEL EKFITHTLPF AEINKAFDLM LKGEGLRCII TMAD

Best Arabidopsis Sequence Match ( AT1G77120.1 )
(BLAST)

001: MSTTGQIIRC KAAVAWEAGK PLVIEEVEVA PPQKHEVRIK ILFTSLCHTD VYFWEAKGQT PLFPRIFGHE AGGIVESVGE GVTDLQPGDH VLPIFTGECG
101: ECRHCHSEES NMCDLLRINT ERGGMIHDGE SRFSINGKPI YHFLGTSTFS EYTVVHSGQV AKINPDAPLD KVCIVSCGLS TGLGATLNVA KPKKGQSVAI
201: FGLGAVGLGA AEGARIAGAS RIIGVDFNSK RFDQAKEFGV TECVNPKDHD KPIQQVIAEM TDGGVDRSVE CTGSVQAMIQ AFECVHDGWG VAVLVGVPSK
301: DDAFKTHPMN FLNERTLKGT FFGNYKPKTD IPGVVEKYMN KELELEKFIT HTVPFSEINK AFDYMLKGES IRCIITMGA

Arabidopsis Description

ADH1Alcohol dehydrogenase class-P [Source:UniProtKB/Swiss-Prot;Acc:P06525]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.