Factsheet for GSMUA_Achr6P18590_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P08040_001	Banana	cytosol	87.11	87.11
GSMUA_Achr9P08450_001	Banana	cytosol	86.58	86.58
GSMUA_Achr8P29470_001	Banana	cytosol	86.05	86.05
PGSC0003DMT400079071	Potato	cytosol	85.53	85.53
KRH64058	Soybean	cytosol, endoplasmic reticulum	84.47	84.25
VIT_18s0001g15410.t01	Wine grape	cytosol	84.21	84.21
Solyc06g059740.2.1	Tomato	plastid	82.37	81.51
GSMUA_Achr11P...	Banana	cytosol	80.0	76.96
HORVU5Hr1G057090.5	Barley	cytosol	63.16	63.16
GSMUA_Achr1P05790_001	Banana	cytosol, plasma membrane	58.95	59.1
GSMUA_Achr4P25400_001	Banana	cytosol, endoplasmic reticulum	51.84	51.71
GSMUA_Achr4P29520_001	Banana	cytosol	54.21	51.63
GSMUA_Achr5P25890_001	Banana	cytosol	28.95	29.57
GSMUA_Achr7P11730_001	Banana	plastid	47.63	28.68
GSMUA_Achr4P19640_001	Banana	cytosol	23.68	24.73
GSMUA_Achr4P19620_001	Banana	cytosol	11.32	24.16
GSMUA_Achr4P19630_001	Banana	cytosol	9.47	23.38
GSMUA_Achr7P11720_001	Banana	mitochondrion, nucleus, plastid	49.21	19.89

Protein Annotations

MapMan:3.11.1.2	Gene3D:3.40.50.720	Gene3D:3.90.180.10	InterPro:ADH_C	InterPro:ADH_N	InterPro:ADH_Zn_CS
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270
GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr6G18590_001	EnsemblPlants:GSMUA_Achr6P18590_001	EnsemblPlants:GSMUA_Achr6T18590_001
InterPro:GroES-like_sf	UniProt:M0T857	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF08240	ScanProsite:PS00059
PANTHER:PTHR43880	PANTHER:PTHR43880:SF22	SUPFAM:SSF50129	SUPFAM:SSF51735	UniParc:UPI000294C4AC	SEG:seg

Description

Alcohol dehydrogenase 3 [Source:GMGC_GENE;Acc:GSMUA_Achr6G18590_001]

Coordinates

chr6:+:12826567..12828487

Molecular Weight (calculated)

41162.6 Da

IEP (calculated)

6.186

GRAVY (calculated)

0.007

Length

380 amino acids

Sequence
(BLAST)

001: MESTVGQVIK CRAAVAWEAG KPLVIEEVEV APPQAMEVRL KILYTSLCHT DVYFWEAKGQ KPIFPRILGH EAAGIVESVG EGVTDLAPGD HVLPVFTGEC
101: KECAHCLSEE SNMCNLLRIN TDRGVMLSDG QSRFTIKGKP INHFLGTSTF SEYTVVHSGC VAKINPLAPL DKVCVLSCGF STGFGATVNV AKPTKGSTVA
201: VFGLGAVGLA AAEGARVSGA SRIIGVDVNP KRFEEAKKFG VNEFVNPKDY DRPVQEVIAE MTGGGADRSV ECTGNIDAMI SAFECVHDGW GVAVLVGVPH
301: KDAVLKTHPV NFLNERTLKG TFFGNYKPRS DLPSVVERYM NKEIELEKFI THEVTFSEIN KAFDYMLQGA SLRCIIRMDG

Best Arabidopsis Sequence Match ( AT1G77120.1 )
(BLAST)

001: MSTTGQIIRC KAAVAWEAGK PLVIEEVEVA PPQKHEVRIK ILFTSLCHTD VYFWEAKGQT PLFPRIFGHE AGGIVESVGE GVTDLQPGDH VLPIFTGECG
101: ECRHCHSEES NMCDLLRINT ERGGMIHDGE SRFSINGKPI YHFLGTSTFS EYTVVHSGQV AKINPDAPLD KVCIVSCGLS TGLGATLNVA KPKKGQSVAI
201: FGLGAVGLGA AEGARIAGAS RIIGVDFNSK RFDQAKEFGV TECVNPKDHD KPIQQVIAEM TDGGVDRSVE CTGSVQAMIQ AFECVHDGWG VAVLVGVPSK
301: DDAFKTHPMN FLNERTLKGT FFGNYKPKTD IPGVVEKYMN KELELEKFIT HTVPFSEINK AFDYMLKGES IRCIITMGA

Arabidopsis Description

ADH1Alcohol dehydrogenase class-P [Source:UniProtKB/Swiss-Prot;Acc:P06525]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.