Factsheet for GSMUA_Achr4P19640_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
EpiLoc:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P19630_001	Banana	cytosol	36.81	87.01
Solyc01g006510.2.1	Tomato	cytosol, extracellular, nucleus, plastid	83.24	85.35
PGSC0003DMT400081907	Potato	cytosol	80.77	84.97
CDY00508	Canola	cytosol	79.95	84.1
Bra028288.1-P	Field mustard	cytosol	79.67	83.81
VIT_16s0100g00300.t01	Wine grape	cytosol	83.79	83.56
KRH09146	Soybean	cytosol, nucleus	83.52	83.52
AT5G51970.1	Thale cress	cytosol	83.24	83.24
GSMUA_Achr4P19620_001	Banana	cytosol	40.66	83.15
CDY58156	Canola	cytosol	82.97	82.97
TraesCS7D01G269800.1	Wheat	cytosol	82.14	81.92
TraesCS7A01G269300.1	Wheat	cytosol	82.14	81.92
TraesCS7B01G167500.1	Wheat	cytosol	81.87	81.64
Os08t0545200-02	Rice	cytosol, plasma membrane, plastid	82.42	81.3
Zm00001d031727_P004	Maize	cytosol, extracellular, plastid	79.95	79.51
EES15252	Sorghum	cytosol	80.49	78.76
HORVU7Hr1G056770.2	Barley	cytosol	81.04	71.43
KRH38627	Soybean	cytosol	83.79	66.16
GSMUA_Achr5P25890_001	Banana	cytosol	26.37	25.81
GSMUA_Achr1P05790_001	Banana	cytosol, plasma membrane	25.27	24.27
GSMUA_Achr6P18590_001	Banana	cytosol	24.73	23.68
GSMUA_Achr9P08450_001	Banana	cytosol	24.18	23.16
GSMUA_Achr11P...	Banana	cytosol	25.0	23.04
GSMUA_Achr8P29470_001	Banana	cytosol	23.9	22.89
GSMUA_Achr4P29520_001	Banana	cytosol	25.0	22.81
GSMUA_Achr2P08040_001	Banana	cytosol	23.63	22.63
GSMUA_Achr4P25400_001	Banana	cytosol, endoplasmic reticulum	22.53	21.52
GSMUA_Achr7P11730_001	Banana	plastid	23.35	13.47
GSMUA_Achr7P11720_001	Banana	mitochondrion, nucleus, plastid	24.18	9.36

Protein Annotations

Gene3D:3.40.50.720	MapMan:3.5.2	Gene3D:3.90.180.10	InterPro:ADH_C	InterPro:ADH_N	InterPro:ADH_Zn_CS
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270
GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr4G19640_001	EnsemblPlants:GSMUA_Achr4P19640_001	EnsemblPlants:GSMUA_Achr4T19640_001
InterPro:GroES-like_sf	UniProt:M0SQC7	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF08240	InterPro:PKS_ER
ScanProsite:PS00059	PANTHER:PTHR43161	PANTHER:PTHR43161:SF8	SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735
UniParc:UPI000296D774	SEG:seg	:	:	:	:

Description

L-idonate 5-dehydrogenase [Source:GMGC_GENE;Acc:GSMUA_Achr4G19640_001]

Coordinates

chr4:+:20531468..20535326

Molecular Weight (calculated)

39127.6 Da

IEP (calculated)

5.885

GRAVY (calculated)

0.117

Length

364 amino acids

Sequence
(BLAST)

001: MGKGGEGSGD GAKVEEENMA AWLVSVNTLK IQPFRLPSLG PYDVRVRMKA VGICGSDVHY LKTLRCAHFV VKEPMVIGHE CAGVIEEVGS DVESLVVGDR
101: VALEPGISCW RCKYCKGGRY NLCPDMKFFA TPPVHGSLAN QVVHPADLCF KLPENVSLEE GAMCEPLSVG IHACRRANVG SETNVLIMGA GPIGLVTMLA
201: ARAFGAPRII IVDVDGYRLS VAKSLGADDV VKVSTNNQDM DEDVVQIQKA MGSDIDVSFD CAGFSKTMST ALNATRAGGK VCLVGMGHNE MTVPLTPAAA
301: REVDVVGIFR YKETWPLCIE FLRSGKIDVK PLITHRFGFS QEEVVEAFEV SARGGDAIKV MFNL

Best Arabidopsis Sequence Match ( AT5G51970.1 )
(BLAST)

001: MGKGGMSQGE GSKVEEENMA AWLVGINTLK IQPFLLPSVG PHDVRVRMKA VGICGSDVHY LKTMRCADFV VKEPMVIGHE CAGIIEEVGE EVKHLVVGDR
101: VALEPGISCW RCNLCREGRY NLCPEMKFFA TPPVHGSLAN QVVHPADLCF KLPENVSLEE GAMCEPLSVG VHACRRAEVG PETNVLVMGA GPIGLVTMLA
201: ARAFSVPRIV IVDVDENRLA VAKQLGADEI VQVTTNLEDV GSEVEQIQKA MGSNIDVTFD CAGFNKTMST ALAATRCGGK VCLVGMGHGI MTVPLTPAAA
301: REVDVVGVFR YKNTWPLCLE FLTSGKIDVK PLITHRFGFS QKEVEDAFET SARGSNAIKV MFNL

Arabidopsis Description

SDHSorbitol dehydrogenase [Source:UniProtKB/Swiss-Prot;Acc:Q9FJ95]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.