Factsheet for GSMUA_Achr4P19630_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P19640_001	Banana	cytosol	87.01	36.81
PGSC0003DMT400081907	Potato	cytosol	77.92	34.68
Solyc01g006510.2.1	Tomato	cytosol, extracellular, nucleus, plastid	79.87	34.65
KRH09146	Soybean	cytosol, nucleus	77.27	32.69
VIT_16s0100g00300.t01	Wine grape	cytosol	77.27	32.6
TraesCS7D01G269800.1	Wheat	cytosol	77.27	32.6
TraesCS7B01G167500.1	Wheat	cytosol	77.27	32.6
TraesCS7A01G269300.1	Wheat	cytosol	77.27	32.6
Bra028288.1-P	Field mustard	cytosol	72.73	32.37
CDY00508	Canola	cytosol	72.73	32.37
Os08t0545200-02	Rice	cytosol, plasma membrane, plastid	77.27	32.25
EES15252	Sorghum	cytosol	75.32	31.18
AT5G51970.1	Thale cress	cytosol	73.38	31.04
CDY58156	Canola	cytosol	72.73	30.77
Zm00001d031727_P004	Maize	cytosol, extracellular, plastid	72.73	30.6
HORVU7Hr1G056770.2	Barley	cytosol	75.32	28.09
KRH38627	Soybean	cytosol	78.57	26.25
GSMUA_Achr5P25890_001	Banana	cytosol	24.68	10.22
GSMUA_Achr6P18590_001	Banana	cytosol	23.38	9.47
GSMUA_Achr1P05790_001	Banana	cytosol, plasma membrane	22.73	9.23
GSMUA_Achr11P...	Banana	cytosol	23.38	9.11
GSMUA_Achr4P29520_001	Banana	cytosol	22.73	8.77
GSMUA_Achr9P08450_001	Banana	cytosol	21.43	8.68
GSMUA_Achr8P29470_001	Banana	cytosol	20.78	8.42
GSMUA_Achr2P08040_001	Banana	cytosol	20.78	8.42
GSMUA_Achr4P25400_001	Banana	cytosol, endoplasmic reticulum	20.78	8.4
GSMUA_Achr7P11730_001	Banana	plastid	22.08	5.39
GSMUA_Achr4P19620_001	Banana	cytosol	4.55	3.93
GSMUA_Achr7P11720_001	Banana	mitochondrion, nucleus, plastid	22.73	3.72

Protein Annotations

EnsemblPlants:GSMUA_Achr4P19630_001	EnsemblPlants:GSMUA_Achr4T19630_001	EnsemblPlantsGene:GSMUA_Achr4G19630_001	Gene3D:3.40.50.720	Gene3D:3.90.180.10	GO:GO:0008150
GO:GO:0008152	GO:GO:0055114	InterPro:ADH_C	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR43161	PANTHER:PTHR43161:SF8
PFAM:PF00107	SUPFAM:SSF51735	UniParc:UPI0002954576	UniProt:M0SQC6	MapMan:3.5.2	:

Description

L-idonate 5-dehydrogenase [Source:GMGC_GENE;Acc:GSMUA_Achr4G19630_001]

Coordinates

chr4:+:20529153..20530169

Molecular Weight (calculated)

16784.0 Da

IEP (calculated)

4.425

GRAVY (calculated)

0.066

Length

154 amino acids

Sequence
(BLAST)

001: MVDVDSYRLS VAKSLGADDF VKVSTNSQDV DEEVIQIQQA MGNDIDVSFD CAGFSKTVST ALNATRAGGK VCLIGMGCNE MTVPLTPAAA REVDVISIFR
101: YKDTWSLCLE FLRTGKTDVK PLITHRFGFS QEELVEAFEV SARGGDAIKV MFNL

Best Arabidopsis Sequence Match ( AT5G51970.1 )
(BLAST)

001: MGKGGMSQGE GSKVEEENMA AWLVGINTLK IQPFLLPSVG PHDVRVRMKA VGICGSDVHY LKTMRCADFV VKEPMVIGHE CAGIIEEVGE EVKHLVVGDR
101: VALEPGISCW RCNLCREGRY NLCPEMKFFA TPPVHGSLAN QVVHPADLCF KLPENVSLEE GAMCEPLSVG VHACRRAEVG PETNVLVMGA GPIGLVTMLA
201: ARAFSVPRIV IVDVDENRLA VAKQLGADEI VQVTTNLEDV GSEVEQIQKA MGSNIDVTFD CAGFNKTMST ALAATRCGGK VCLVGMGHGI MTVPLTPAAA
301: REVDVVGVFR YKNTWPLCLE FLTSGKIDVK PLITHRFGFS QKEVEDAFET SARGSNAIKV MFNL

Arabidopsis Description

SDHSorbitol dehydrogenase [Source:UniProtKB/Swiss-Prot;Acc:Q9FJ95]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.