CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 6
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d031727_P004	Maize	cytosol, extracellular, plastid	90.86	92.35
Os08t0545200-02	Rice	cytosol, plasma membrane, plastid	87.63	88.35
TraesCS7D01G269800.1	Wheat	cytosol	84.68	86.3
TraesCS7B01G167500.1	Wheat	cytosol	84.68	86.3
TraesCS7A01G269300.1	Wheat	cytosol	84.41	86.03
Bra028288.1-P	Field mustard	cytosol	75.0	80.64
GSMUA_Achr4P19640_001	Banana	cytosol	78.76	80.49
CDY00508	Canola	cytosol	74.73	80.35
PGSC0003DMT400081907	Potato	cytosol	74.19	79.77
Solyc01g006510.2.1	Tomato	cytosol, extracellular, nucleus, plastid	76.08	79.72
CDY58156	Canola	cytosol	77.42	79.12
KRH09146	Soybean	cytosol, nucleus	76.88	78.57
VIT_16s0100g00300.t01	Wine grape	cytosol	76.34	77.81
AT5G51970.1	Thale cress	cytosol	76.08	77.75
HORVU7Hr1G056770.2	Barley	cytosol	84.14	75.79
GSMUA_Achr4P19630_001	Banana	cytosol	31.18	75.32
GSMUA_Achr4P19620_001	Banana	cytosol	34.68	72.47
PGSC0003DMT400065063	Potato	cytosol	65.86	69.01
KRH38627	Soybean	cytosol	75.81	61.17
Solyc06g035680.1.1	Tomato	cytosol	27.69	57.87
VIT_16s0100g00290.t01	Wine grape	cytosol, endoplasmic reticulum, plasma membrane	69.62	33.59
KXG24208	Sorghum	mitochondrion	26.61	23.52
EES06008	Sorghum	cytosol	23.92	23.36
EES08380	Sorghum	cytosol	23.66	23.22
EER91718	Sorghum	cytosol	24.46	23.1
KXG37606	Sorghum	cytosol	23.39	22.96
KXG40001	Sorghum	cytosol	23.39	22.83
KXG36724	Sorghum	cytosol	21.77	22.38
KXG36722	Sorghum	cytosol	23.92	22.31
EES07202	Sorghum	cytosol	22.85	22.14
EER91716	Sorghum	cytosol	23.12	21.5
KXG39999	Sorghum	cytosol	23.12	20.72
KXG28254	Sorghum	cytosol	13.17	18.28

Protein Annotations

Gene3D:3.40.50.720	MapMan:3.5.2	Gene3D:3.90.180.10	EntrezGene:8057862	InterPro:ADH_C	InterPro:ADH_N
InterPro:ADH_Zn_CS	UniProt:C5YH68	EnsemblPlants:EES15252	ProteinID:EES15252	ProteinID:EES15252.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0016491
GO:GO:0046872	GO:GO:0055114	InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF08240
InterPro:PKS_ER	ScanProsite:PS00059	PANTHER:PTHR43161	PANTHER:PTHR43161:SF8	SMART:SM00829	EnsemblPlantsGene:SORBI_3007G181600
SUPFAM:SSF50129	SUPFAM:SSF51735	unigene:Sbi.10097	UniParc:UPI0001A87E7F	RefSeq:XP_002445757.1	SEG:seg

Description

hypothetical protein

Coordinates

chr7:-:61481623..61484493

Molecular Weight (calculated)

39474.0 Da

IEP (calculated)

6.502

GRAVY (calculated)

0.152

Length

372 amino acids

Sequence
(BLAST)

001: MGKGAQGSDA AVAAAAAAGA GEVEENMAAW LVAKNTLKIM PFQLPPLGPH DVRVRMKAVG ICGSDVHYLR EMRIAHFVVK EPMVIGHECA GVIEEVGAGV
101: THLTVGDRVA LEPGVSCWRC RHCKGGRYNL CPDMKFFATP PFHGSLANQV VHPGDLCFKL PDGVSLEEGA MCEPLSVGVH ACRRAGVGPE TGVLVVGAGP
201: IGLVTLLAAR AFGAPKVVIV DVDDHRLSVA TSLGADATVK VSTRAEDLES EVERIQAAMG SEIDVSLDCA GFSKTMSTAL EATRPGGKVC LVGMGHNEMT
301: LPMTSAAARE VDVVGVFRYK DTWPLCIDFL RTGKVDVKPL ITHRFGFSQR DVEEAFEVSA RGRDAIKVMF NL

Best Arabidopsis Sequence Match ( AT5G51970.1 )
(BLAST)

001: MGKGGMSQGE GSKVEEENMA AWLVGINTLK IQPFLLPSVG PHDVRVRMKA VGICGSDVHY LKTMRCADFV VKEPMVIGHE CAGIIEEVGE EVKHLVVGDR
101: VALEPGISCW RCNLCREGRY NLCPEMKFFA TPPVHGSLAN QVVHPADLCF KLPENVSLEE GAMCEPLSVG VHACRRAEVG PETNVLVMGA GPIGLVTMLA
201: ARAFSVPRIV IVDVDENRLA VAKQLGADEI VQVTTNLEDV GSEVEQIQKA MGSNIDVTFD CAGFNKTMST ALAATRCGGK VCLVGMGHGI MTVPLTPAAA
301: REVDVVGVFR YKNTWPLCLE FLTSGKIDVK PLITHRFGFS QKEVEDAFET SARGSNAIKV MFNL

Arabidopsis Description

SDHSorbitol dehydrogenase [Source:UniProtKB/Swiss-Prot;Acc:Q9FJ95]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.