Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G269300.1 | Wheat | cytosol | 99.73 | 99.73 |
| TraesCS7B01G167500.1 | Wheat | cytosol | 99.45 | 99.45 |
| Os08t0545200-02 | Rice | cytosol, plasma membrane, plastid | 89.04 | 88.08 |
| HORVU7Hr1G056770.2 | Barley | cytosol | 96.99 | 85.71 |
| EES15252 | Sorghum | cytosol | 86.3 | 84.68 |
| Zm00001d031727_P004 | Maize | cytosol, extracellular, plastid | 84.66 | 84.43 |
| GSMUA_Achr4P19640_001 | Banana | cytosol | 81.92 | 82.14 |
| PGSC0003DMT400081907 | Potato | cytosol | 77.81 | 82.08 |
| Solyc01g006510.2.1 | Tomato | cytosol, extracellular, nucleus, plastid | 79.73 | 81.97 |
| CDY00508 | Canola | cytosol | 76.44 | 80.64 |
| KRH09146 | Soybean | cytosol, nucleus | 80.27 | 80.49 |
| Bra028288.1-P | Field mustard | cytosol | 76.16 | 80.35 |
| CDY58156 | Canola | cytosol | 78.63 | 78.85 |
| VIT_16s0100g00300.t01 | Wine grape | cytosol | 78.63 | 78.63 |
| AT5G51970.1 | Thale cress | cytosol | 78.08 | 78.3 |
| GSMUA_Achr4P19630_001 | Banana | cytosol | 32.6 | 77.27 |
| GSMUA_Achr4P19620_001 | Banana | cytosol | 35.07 | 71.91 |
| PGSC0003DMT400065063 | Potato | cytosol | 67.12 | 69.01 |
| KRH38627 | Soybean | cytosol | 80.0 | 63.34 |
| Solyc06g035680.1.1 | Tomato | cytosol | 28.49 | 58.43 |
| VIT_16s0100g00290.t01 | Wine grape | cytosol, endoplasmic reticulum, plasma membrane | 72.88 | 34.5 |
| TraesCS4D01G103300.1 | Wheat | cytosol | 24.66 | 25.94 |
| TraesCS4D01G103100.1 | Wheat | cytosol | 26.3 | 25.33 |
| TraesCS4D01G103000.1 | Wheat | golgi | 25.75 | 24.8 |
| TraesCS1D01G376300.1 | Wheat | cytosol, golgi | 25.75 | 24.8 |
| TraesCS5D01G196300.2 | Wheat | cytosol | 25.21 | 24.27 |
| TraesCS7D01G319100.1 | Wheat | mitochondrion | 27.12 | 23.86 |
| TraesCS6D01G217000.3 | Wheat | cytosol | 24.38 | 23.0 |
| TraesCS6D01G371200.1 | Wheat | golgi | 23.84 | 22.83 |
| TraesCS1D01G052200.1 | Wheat | cytosol | 24.38 | 22.59 |
| TraesCS4D01G303900.1 | Wheat | cytosol | 23.56 | 22.22 |
| TraesCS2D01G170900.1 | Wheat | cytosol | 24.11 | 21.15 |
| TraesCS4D01G303800.1 | Wheat | cytosol | 21.64 | 20.68 |
| TraesCS2D01G170800.1 | Wheat | cytosol | 21.64 | 20.57 |
Protein Annotations
| Gene3D:3.40.50.720 | MapMan:3.5.2 | Gene3D:3.90.180.10 | InterPro:ADH_C | InterPro:ADH_N | InterPro:ADH_Zn_CS |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 |
| GO:GO:0016491 | GO:GO:0055114 | InterPro:GroES-like_sf | InterPro:NAD(P)-bd_dom_sf | PFAM:PF00107 | PFAM:PF08240 |
| InterPro:PKS_ER | ScanProsite:PS00059 | PANTHER:PTHR43161 | PANTHER:PTHR43161:SF8 | SMART:SM00829 | SUPFAM:SSF50129 |
| SUPFAM:SSF51735 | EnsemblPlantsGene:TraesCS7D01G269800 | EnsemblPlants:TraesCS7D01G269800.1 | TIGR:cd05285 | SEG:seg | : |
Description
No Description!
Coordinates
chr7D:+:254978546..254984312
Molecular Weight (calculated)
39032.6 Da
IEP (calculated)
6.575
GRAVY (calculated)
0.109
Length
365 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKGGKGEAA AAVAGEGENM AAWLVAKNTL KIMPFKLPPL GPYDVRVRMK AVGICGSDVH YLKEMRIAHF VVKEPMVIGH ECAGIIEEVG DGVKHLAVGD
101: RVALEPGISC WRCRHCKGGR YNLCDDMKFF ATPPYHGSLA DQIVHPGDLC FKLPDNVSLE EGAMCEPLSV GVHACRRADV GAEKSVLIMG AGPIGLVTML
201: SARAFGAPRI VIADVDDHRL SVAKSLGADA VVKVSGNAED LAGEIERIQA AMGGDIDVSL DCAGFSKTMS TALEATRPGG RVCLVGMGHN EMTVPLTSAA
301: IREVDVVGIF RYKDTWPLCL EFLRSGKIDV KPLITHRFGF SQGEVEEAFE VSARGRDAIK VMFNL
101: RVALEPGISC WRCRHCKGGR YNLCDDMKFF ATPPYHGSLA DQIVHPGDLC FKLPDNVSLE EGAMCEPLSV GVHACRRADV GAEKSVLIMG AGPIGLVTML
201: SARAFGAPRI VIADVDDHRL SVAKSLGADA VVKVSGNAED LAGEIERIQA AMGGDIDVSL DCAGFSKTMS TALEATRPGG RVCLVGMGHN EMTVPLTSAA
301: IREVDVVGIF RYKDTWPLCL EFLRSGKIDV KPLITHRFGF SQGEVEEAFE VSARGRDAIK VMFNL
001: MGKGGMSQGE GSKVEEENMA AWLVGINTLK IQPFLLPSVG PHDVRVRMKA VGICGSDVHY LKTMRCADFV VKEPMVIGHE CAGIIEEVGE EVKHLVVGDR
101: VALEPGISCW RCNLCREGRY NLCPEMKFFA TPPVHGSLAN QVVHPADLCF KLPENVSLEE GAMCEPLSVG VHACRRAEVG PETNVLVMGA GPIGLVTMLA
201: ARAFSVPRIV IVDVDENRLA VAKQLGADEI VQVTTNLEDV GSEVEQIQKA MGSNIDVTFD CAGFNKTMST ALAATRCGGK VCLVGMGHGI MTVPLTPAAA
301: REVDVVGVFR YKNTWPLCLE FLTSGKIDVK PLITHRFGFS QKEVEDAFET SARGSNAIKV MFNL
101: VALEPGISCW RCNLCREGRY NLCPEMKFFA TPPVHGSLAN QVVHPADLCF KLPENVSLEE GAMCEPLSVG VHACRRAEVG PETNVLVMGA GPIGLVTMLA
201: ARAFSVPRIV IVDVDENRLA VAKQLGADEI VQVTTNLEDV GSEVEQIQKA MGSNIDVTFD CAGFNKTMST ALAATRCGGK VCLVGMGHGI MTVPLTPAAA
301: REVDVVGVFR YKNTWPLCLE FLTSGKIDVK PLITHRFGFS QKEVEDAFET SARGSNAIKV MFNL
Arabidopsis Description
SDHSorbitol dehydrogenase [Source:UniProtKB/Swiss-Prot;Acc:Q9FJ95]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.