Factsheet for PGSC0003DMT400081907

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 4
plastid 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g006510.2.1	Tomato	cytosol, extracellular, nucleus, plastid	97.69	95.21
CDY00508	Canola	cytosol	86.99	86.99
Bra028288.1-P	Field mustard	cytosol	86.71	86.71
VIT_16s0100g00300.t01	Wine grape	cytosol	87.28	82.74
AT5G51970.1	Thale cress	cytosol	86.71	82.42
CDY58156	Canola	cytosol	86.42	82.14
KRH09146	Soybean	cytosol, nucleus	85.26	81.04
GSMUA_Achr4P19640_001	Banana	cytosol	84.97	80.77
GSMUA_Achr4P19630_001	Banana	cytosol	34.68	77.92
TraesCS7D01G269800.1	Wheat	cytosol	82.08	77.81
TraesCS7B01G167500.1	Wheat	cytosol	82.08	77.81
TraesCS7A01G269300.1	Wheat	cytosol	82.08	77.81
Zm00001d031727_P004	Maize	cytosol, extracellular, plastid	78.61	74.32
Os08t0545200-02	Rice	cytosol, plasma membrane, plastid	79.19	74.25
EES15252	Sorghum	cytosol	79.77	74.19
PGSC0003DMT400065063	Potato	cytosol	73.7	71.83
HORVU7Hr1G056770.2	Barley	cytosol	81.21	68.04
KRH38627	Soybean	cytosol	85.55	64.21
PGSC0003DMT400019942	Potato	cytosol	26.01	23.75
PGSC0003DMT400063937	Potato	cytosol	25.72	23.48
PGSC0003DMT400047760	Potato	cytosol	25.14	23.26
PGSC0003DMT400079071	Potato	cytosol	25.43	23.16
PGSC0003DMT400038526	Potato	cytosol	20.23	23.03
PGSC0003DMT400059936	Potato	plastid	28.61	22.92
PGSC0003DMT400038525	Potato	cytosol	24.28	22.28
PGSC0003DMT400025617	Potato	cytosol	24.57	21.91
PGSC0003DMT400075618	Potato	cytosol	24.28	21.59
PGSC0003DMT400031884	Potato	cytosol	23.41	21.32
PGSC0003DMT400038529	Potato	cytosol	19.65	21.25
PGSC0003DMT400079175	Potato	cytosol	22.54	20.16

Protein Annotations

Gene3D:3.40.50.720	MapMan:3.5.2	Gene3D:3.90.180.10	InterPro:ADH_C	InterPro:ADH_N	InterPro:ADH_Zn_CS
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270
GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	InterPro:GroES-like_sf	UniProt:M1D596	InterPro:NAD(P)-bd_dom_sf
PFAM:PF00107	PFAM:PF08240	EnsemblPlantsGene:PGSC0003DMG400032154	PGSC:PGSC0003DMG400032154	EnsemblPlants:PGSC0003DMT400081907	InterPro:PKS_ER
ScanProsite:PS00059	PANTHER:PTHR43161	PANTHER:PTHR43161:SF8	SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735
UniParc:UPI00029614C2	:	:	:	:	:

Description

Alcohol dehydrogenase [Source:PGSC_GENE;Acc:PGSC0003DMG400032154]

Coordinates

chr1:+:2090383..2095569

Molecular Weight (calculated)

37325.8 Da

IEP (calculated)

6.762

GRAVY (calculated)

0.177

Length

346 amino acids

Sequence
(BLAST)

001: MAAWLLGVNT LKIQPFNLPA LGPHDVRVRM KAVGICGSDV HYLKTMRCAD FVVKEPMVIG HECAGIIEEV GGEVKTLVPG DRVALEPGIS CWRCDLCKEG
101: RYNLCPEMKF FATPPVHGSL ANQVVHPADL CFKLPDNISL EEGAMCEPLS VGVHACRRAN VGPETNILVL GAGPIGLVTL LAARAFGAPR IVIVDVDDYR
201: LSVAKKLGAD EIVKVSINLQ DVATDIENIQ KAMGGGIDVS FDCAGFNKTM STALGATRPG GKVCLVGMGH HEMTVPLTPA AAREVDIIGI FRYKNTWPLC
301: LEFLRSGKID VKPMITHRFG FSQKEVEEAF ETSARGGDAI KVMFNL

Best Arabidopsis Sequence Match ( AT5G51970.1 )
(BLAST)

001: MGKGGMSQGE GSKVEEENMA AWLVGINTLK IQPFLLPSVG PHDVRVRMKA VGICGSDVHY LKTMRCADFV VKEPMVIGHE CAGIIEEVGE EVKHLVVGDR
101: VALEPGISCW RCNLCREGRY NLCPEMKFFA TPPVHGSLAN QVVHPADLCF KLPENVSLEE GAMCEPLSVG VHACRRAEVG PETNVLVMGA GPIGLVTMLA
201: ARAFSVPRIV IVDVDENRLA VAKQLGADEI VQVTTNLEDV GSEVEQIQKA MGSNIDVTFD CAGFNKTMST ALAATRCGGK VCLVGMGHGI MTVPLTPAAA
301: REVDVVGVFR YKNTWPLCLE FLTSGKIDVK PLITHRFGFS QKEVEDAFET SARGSNAIKV MFNL

Arabidopsis Description

SDHSorbitol dehydrogenase [Source:UniProtKB/Swiss-Prot;Acc:Q9FJ95]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.