Factsheet for PGSC0003DMT400025617

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g082180.2.1	Tomato	cytosol	93.04	92.56
PGSC0003DMT400075618	Potato	cytosol	77.58	77.38
VIT_18s0001g00380.t01	Wine grape	cytosol	73.97	74.93
KRH14690	Soybean	cytosol	70.88	71.06
KRG89834	Soybean	cytosol	71.39	70.66
KRH73443	Soybean	cytosol	69.85	70.21
KRH73446	Soybean	cytosol	69.85	70.03
AT5G42250.1	Thale cress	cytosol	68.3	67.95
VIT_18s0001g00410.t01	Wine grape	cytosol	69.07	67.85
Bra025081.1-P	Field mustard	cytosol	67.78	67.61
CDY39423	Canola	cytosol	67.53	67.35
CDY64947	Canola	cytosol	66.75	66.58
PGSC0003DMT400079175	Potato	cytosol	58.76	58.91
PGSC0003DMT400079071	Potato	cytosol	51.03	52.11
PGSC0003DMT400063937	Potato	cytosol	50.52	51.72
KRH14696	Soybean	cytosol	17.01	50.0
PGSC0003DMT400019942	Potato	cytosol	48.2	49.34
PGSC0003DMT400031884	Potato	cytosol	47.94	48.95
PGSC0003DMT400047760	Potato	cytosol	41.75	43.32
PGSC0003DMT400038525	Potato	cytosol	42.01	43.24
PGSC0003DMT400038529	Potato	cytosol	34.79	42.19
PGSC0003DMT400038526	Potato	cytosol	32.47	41.45
PGSC0003DMT400081907	Potato	cytosol	21.91	24.57
PGSC0003DMT400059936	Potato	plastid	27.32	24.54
PGSC0003DMT400065063	Potato	cytosol	22.16	24.23

Protein Annotations

EntrezGene:102589498	Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:35.1	InterPro:ADH_C	InterPro:ADH_N
InterPro:ADH_Zn_CS	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0008270	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	InterPro:GroES-like_sf	UniProt:M1ALQ8
InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF08240	EnsemblPlantsGene:PGSC0003DMG400009895	PGSC:PGSC0003DMG400009895	EnsemblPlants:PGSC0003DMT400025617
ScanProsite:PS00059	PANTHER:PTHR43880	PANTHER:PTHR43880:SF7	SUPFAM:SSF50129	SUPFAM:SSF51735	UniParc:UPI0002951027
RefSeq:XP_006342106.1	:	:	:	:	:

Description

Alcohol dehydrogenase ADH [Source:PGSC_GENE;Acc:PGSC0003DMG400009895]

Coordinates

chr4:+:71439420..71442107

Molecular Weight (calculated)

42311.3 Da

IEP (calculated)

6.983

GRAVY (calculated)

0.062

Length

388 amino acids

Sequence
(BLAST)

001: MASTKQYFSA AGKPIRCKAA VARKAGEPLV IEEVIVAPPK AHEVRLKIIC TSLCYTDIIV WRMKEFPGCL PRILGHEAFG VVESVGEDVN EFKEGDSVVP
101: IFLPDCMDCV DCKSKKSNLC SKFPFQASPL LHRDDTSRFT NAEGETLHHF LYISSFSEYT VVDVVNVTKI DPEIPPNRAC LLSCGVSTGV GAAWKTANVE
201: PGSTVVIFGL GSVGLAVAEG ARLCGATRII GVGRNSDKFE IGKQFGVTEF VNSKSCGDKP VSQVIIEMTN GGADYCFECV GLATLVQEAF ACCRKGWGKT
301: IVLGVDKPDA QLNLSSFEVL QSQKTLTGSF FGGLKPKSDV PILVKRYLDK ELELDKFVTH EVNFKDINKA FDLLIQGKSL RCVIWMDK

Best Arabidopsis Sequence Match ( AT5G42250.1 )
(BLAST)

001: MENGNSSSDN KSSHKPIRCK AAVSRKAGEP LVMEEIMVAP PQPFEVRIRI ICTALCHSDV TFWKLQVPPA CFPRILGHEA IGVVESVGEN VKEVVEGDTV
101: LPTFMPDCGD CVDCKSHKSN LCSKFPFKVS PWMPRYDNSS RFTDLNGETL FHFLNVSSFS EYTVLDVANV VKIDSSIPPS RACLLSCGVS TGVGAAWETA
201: KVEKGSTVVI FGLGSIGLAV AEGARLCGAS RIIGVDINPT KFQVGQKFGV TEFVNSMTCE KNRVSEVINE MTDGGADYCF ECVGSSSLVQ EAYACCRQGW
301: GKTITLGVDK PGSQICLDSF DVLHHGKILM GSLFGGLKAK THIPILLKRY LSNELELDKF VTHEMKFEEI NDAFQLLLEG KCIRCVLWMG

Arabidopsis Description

Alcohol dehydrogenase-like 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FH04]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.