Factsheet for PGSC0003DMT400079071

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g059740.2.1	Tomato	plastid	94.21	93.23
KXG28254	Sorghum	cytosol	61.32	86.94
VIT_18s0001g15410.t01	Wine grape	cytosol	86.32	86.32
KRH64058	Soybean	cytosol, endoplasmic reticulum	86.05	85.83
Zm00001d033931_P002	Maize	cytosol, extracellular, plasma membrane	85.53	85.75
TraesCS4B01G106300.1	Wheat	cytosol, golgi	85.53	85.75
Os11t0210300-01	Rice	plasma membrane	85.53	85.75
TraesCS1D01G376300.1	Wheat	cytosol, golgi	85.53	85.75
GSMUA_Achr6P18590_001	Banana	cytosol	85.53	85.53
PGSC0003DMT400063937	Potato	cytosol	85.26	85.49
TraesCS4D01G103000.1	Wheat	golgi	85.26	85.49
TraesCS4A01G202100.2	Wheat	cytosol	85.26	85.49
TraesCS1B01G389200.1	Wheat	cytosol	85.0	85.22
KXG37606	Sorghum	cytosol	84.74	84.96
TraesCS4B01G106500.1	Wheat	cytosol	84.21	84.43
TraesCS4A01G202300.1	Wheat	cytosol	83.95	84.17
TraesCS4B01G106400.1	Wheat	cytosol	83.16	84.04
TraesCS4D01G103100.1	Wheat	cytosol	83.68	83.91
TraesCS4D01G103300.1	Wheat	cytosol	76.58	83.86
TraesCS4A01G202200.1	Wheat	cytosol	83.42	83.64
Zm00001d049059_P001	Maize	cytosol, extracellular	83.42	83.64
EES08380	Sorghum	cytosol	83.16	83.38
TraesCS5D01G196300.2	Wheat	cytosol	83.16	83.38
TraesCS5A01G193900.1	Wheat	cytosol	80.53	83.15
TraesCS1A01G370200.1	Wheat	cytosol	82.63	83.07
TraesCS1A01G370100.1	Wheat	cytosol	82.89	82.89
TraesCS5B01G189200.1	Wheat	cytosol	82.11	82.32
Os11t0210500-01	Rice	cytosol, plastid	81.58	81.79
Os11t0210600-01	Rice	cytosol	63.42	81.14
HORVU5Hr1G057090.5	Barley	cytosol	64.74	64.74
PGSC0003DMT400019942	Potato	cytosol	59.21	59.37
PGSC0003DMT400025617	Potato	cytosol	52.11	51.03
PGSC0003DMT400031884	Potato	cytosol	50.79	50.79
PGSC0003DMT400075618	Potato	cytosol	51.05	49.87
PGSC0003DMT400079175	Potato	cytosol	50.0	49.1
PGSC0003DMT400038525	Potato	cytosol	42.63	42.97
PGSC0003DMT400038529	Potato	cytosol	36.05	42.81
PGSC0003DMT400038526	Potato	cytosol	34.21	42.76
PGSC0003DMT400047760	Potato	cytosol	39.74	40.37
CDX73268	Canola	cytosol	4.21	35.56
PGSC0003DMT400081907	Potato	cytosol	23.16	25.43
PGSC0003DMT400059936	Potato	plastid	28.16	24.77
PGSC0003DMT400065063	Potato	cytosol	22.63	24.23

Protein Annotations

MapMan:3.11.1.2	Gene3D:3.40.50.720	Gene3D:3.90.180.10	ProteinID:AAA33806	ProteinID:AAA33806.1	ProteinID:AAA33807
ProteinID:AAA33807.1	ProteinID:AAA33808	ProteinID:AAA33808.1	InterPro:ADH_C	InterPro:ADH_N	InterPro:ADH_Zn_CS
ProteinID:CAA37333	ProteinID:CAA37333.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004022	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152
GO:GO:0008270	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	InterPro:GroES-like_sf	UniProt:M1D165
EMBL:M25152	EMBL:M25153	EMBL:M25154	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF08240
EnsemblPlantsGene:PGSC0003DMG400030771	PGSC:PGSC0003DMG400030771	EnsemblPlants:PGSC0003DMT400079071	ScanProsite:PS00059	PANTHER:PTHR43880	PANTHER:PTHR43880:SF22
SUPFAM:SSF50129	SUPFAM:SSF51735	UniParc:UPI000295527C	EMBL:X53242	SEG:seg	:

Description

Alcohol dehydrogenase 3 [Source:PGSC_GENE;Acc:PGSC0003DMG400030771]

Coordinates

chr6:+:41213848..41216108

Molecular Weight (calculated)

41158.8 Da

IEP (calculated)

6.287

GRAVY (calculated)

0.047

Length

380 amino acids

Sequence
(BLAST)

001: MSTTVGQVIR CKAAVAWEAG KPLVMEEVDV APPQKMEVRL KILYTSLCHT DVYFWEAKGQ NPVFPRILGH EAAGIVESVG EGVTELAPGD HVLPIFTGEC
101: KDCAHCKSEE SNMCSLLRIN TDRGVMINDG QSRFSINGKP IYHFVGTSTF SEYTVVHVGC VAKINPLAPL DKVCVLSCGI STGLGATLNV AKPTKGSSVA
201: IFGLGAVGLA AAEGARIAGA SRIIGVDLNA SRFEQAKKFG VTEFVNPKDY SKPVQEVIAE MTDGGVDRSV ECTGHIDAMI SAFECVHDGW GVAVLVGVPH
301: KEAVFKTHPM NFLNERTLKG TFFGNYKPRS DIPSVVEKYM NKELELEKFI THTLPFAEIN KAFDLMLKGE GLRCIITMED

Best Arabidopsis Sequence Match ( AT1G77120.1 )
(BLAST)

001: MSTTGQIIRC KAAVAWEAGK PLVIEEVEVA PPQKHEVRIK ILFTSLCHTD VYFWEAKGQT PLFPRIFGHE AGGIVESVGE GVTDLQPGDH VLPIFTGECG
101: ECRHCHSEES NMCDLLRINT ERGGMIHDGE SRFSINGKPI YHFLGTSTFS EYTVVHSGQV AKINPDAPLD KVCIVSCGLS TGLGATLNVA KPKKGQSVAI
201: FGLGAVGLGA AEGARIAGAS RIIGVDFNSK RFDQAKEFGV TECVNPKDHD KPIQQVIAEM TDGGVDRSVE CTGSVQAMIQ AFECVHDGWG VAVLVGVPSK
301: DDAFKTHPMN FLNERTLKGT FFGNYKPKTD IPGVVEKYMN KELELEKFIT HTVPFSEINK AFDYMLKGES IRCIITMGA

Arabidopsis Description

ADH1Alcohol dehydrogenase class-P [Source:UniProtKB/Swiss-Prot;Acc:P06525]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.