Factsheet for TraesCS1A01G370200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G389200.1	Wheat	cytosol	96.03	95.78
TraesCS4A01G202200.1	Wheat	cytosol	94.71	94.46
TraesCS4A01G202300.1	Wheat	cytosol	94.44	94.2
HORVU4Hr1G016770.2	Barley	cytosol	94.44	93.95
TraesCS1A01G370100.1	Wheat	cytosol	93.12	92.63
TraesCS5A01G193900.1	Wheat	cytosol	88.1	90.49
EES08380	Sorghum	cytosol	90.48	90.24
Zm00001d049059_P001	Maize	cytosol, extracellular	89.95	89.71
Os11t0210500-01	Rice	cytosol, plastid	89.42	89.18
TraesCS4A01G202100.2	Wheat	cytosol	85.19	84.96
PGSC0003DMT400079071	Potato	cytosol	83.07	82.63
GSMUA_Achr2P08040_001	Banana	cytosol	83.07	82.63
VIT_18s0001g15410.t01	Wine grape	cytosol	82.54	82.11
GSMUA_Achr8P29470_001	Banana	cytosol	82.28	81.84
KRH64058	Soybean	cytosol, endoplasmic reticulum	80.69	80.05
GSMUA_Achr9P08450_001	Banana	cytosol	80.16	79.74
Solyc06g059740.2.1	Tomato	plastid	79.1	77.86
TraesCS6A01G386600.1	Wheat	cytosol	57.14	56.69
TraesCS1A01G050100.2	Wheat	cytosol	54.23	52.03
TraesCS6A01G234500.2	Wheat	cytosol	50.0	49.22
TraesCS4A01G406200.1	Wheat	golgi	49.21	47.94
TraesCS2A01G163900.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	49.47	43.19
TraesCS4A01G406100.2	Wheat	cytosol	43.39	41.41
CDX73268	Canola	cytosol	3.97	33.33
TraesCS7A01G322200.1	Wheat	mitochondrion	30.69	27.95
TraesCS7A01G269300.1	Wheat	cytosol	25.13	26.03

Protein Annotations

MapMan:3.11.1.2	Gene3D:3.40.50.720	Gene3D:3.90.180.10	InterPro:ADH_C	InterPro:ADH_N	InterPro:ADH_Zn_CS
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270
GO:GO:0016491	GO:GO:0055114	InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF08240
ScanProsite:PS00059	PANTHER:PTHR43880	PANTHER:PTHR43880:SF17	SUPFAM:SSF50129	SUPFAM:SSF51735	EnsemblPlantsGene:TraesCS1A01G370200
EnsemblPlants:TraesCS1A01G370200.1	TIGR:cd08301	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr1A:-:547410788..547417410

Molecular Weight (calculated)

40831.7 Da

IEP (calculated)

6.234

GRAVY (calculated)

0.081

Length

378 amino acids

Sequence
(BLAST)

001: MATAGKVIKC KAAVAWEAGK PLSIEEVEVA PPQAMEVRVK ILYTALCHTD VYFWEAKGQT PVFPRILGHE AGGIVESVGE GVIELVPGDH VLPVFTGECK
101: DCAHCKSEES NLCDLLRPVD RGVMIGDGQS RFTINGKPIF HFAGTSTFSE YIVIHVGCLA KINPEAPLDK VCVLSCGIST GLGATLNVAK PKKGSTVAIF
201: GLGAVGLAAM EGARMAGASR IIGVDLNPAK YEHAKEFGCT DFVNPKDHTK PVQEVLVEMT NGGVDRAVEC TGDIDAMIAA FECVHDGWGV AVLVGVPHKE
301: AVFKTHPVNF LNEKTLKGTL FGNYKPRTDL PKVVEMYMRK ELDLEKFITH SVPFSEINTA FDLMLKGEGL RCIMRMDQ

Best Arabidopsis Sequence Match ( AT1G77120.1 )
(BLAST)

001: MSTTGQIIRC KAAVAWEAGK PLVIEEVEVA PPQKHEVRIK ILFTSLCHTD VYFWEAKGQT PLFPRIFGHE AGGIVESVGE GVTDLQPGDH VLPIFTGECG
101: ECRHCHSEES NMCDLLRINT ERGGMIHDGE SRFSINGKPI YHFLGTSTFS EYTVVHSGQV AKINPDAPLD KVCIVSCGLS TGLGATLNVA KPKKGQSVAI
201: FGLGAVGLGA AEGARIAGAS RIIGVDFNSK RFDQAKEFGV TECVNPKDHD KPIQQVIAEM TDGGVDRSVE CTGSVQAMIQ AFECVHDGWG VAVLVGVPSK
301: DDAFKTHPMN FLNERTLKGT FFGNYKPKTD IPGVVEKYMN KELELEKFIT HTVPFSEINK AFDYMLKGES IRCIITMGA

Arabidopsis Description

ADH1Alcohol dehydrogenase class-P [Source:UniProtKB/Swiss-Prot;Acc:P06525]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.