Factsheet for TraesCS5A01G193900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G196300.2	Wheat	cytosol	99.18	96.31
TraesCS5B01G189200.1	Wheat	cytosol	97.83	94.99
TraesCS4A01G202300.1	Wheat	cytosol	92.93	90.24
TraesCS4A01G202200.1	Wheat	cytosol	92.66	89.97
TraesCS1A01G370200.1	Wheat	cytosol	90.49	88.1
TraesCS1A01G370100.1	Wheat	cytosol	89.95	87.11
Os11t0210500-01	Rice	cytosol, plastid	89.13	86.54
EES08380	Sorghum	cytosol	88.86	86.28
Zm00001d049059_P001	Maize	cytosol, extracellular	88.32	85.75
TraesCS4A01G202100.2	Wheat	cytosol	85.33	82.85
PGSC0003DMT400079071	Potato	cytosol	83.15	80.53
GSMUA_Achr2P08040_001	Banana	cytosol	81.79	79.21
VIT_18s0001g15410.t01	Wine grape	cytosol	81.52	78.95
GSMUA_Achr8P29470_001	Banana	cytosol	80.98	78.42
KRH64058	Soybean	cytosol, endoplasmic reticulum	79.35	76.64
GSMUA_Achr9P08450_001	Banana	cytosol	79.08	76.58
Solyc06g059740.2.1	Tomato	plastid	78.53	75.26
TraesCS6A01G386600.1	Wheat	cytosol	57.61	55.64
TraesCS1A01G050100.2	Wheat	cytosol	56.25	52.54
TraesCS6A01G234500.2	Wheat	cytosol	50.27	48.18
TraesCS4A01G406200.1	Wheat	golgi	48.37	45.88
TraesCS2A01G163900.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	49.18	41.8
TraesCS4A01G406100.2	Wheat	cytosol	44.84	41.67
CDX73268	Canola	cytosol	4.08	33.33
TraesCS7A01G322200.1	Wheat	mitochondrion	30.43	26.99
TraesCS7A01G269300.1	Wheat	cytosol	24.73	24.93

Protein Annotations

MapMan:3.11.1.2	Gene3D:3.40.50.720	InterPro:ADH_C	InterPro:ADH_N	InterPro:ADH_Zn_CS	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0016491
GO:GO:0055114	InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF08240	InterPro:PKS_ER
ScanProsite:PS00059	PANTHER:PTHR43880	PANTHER:PTHR43880:SF17	SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735
EnsemblPlantsGene:TraesCS5A01G193900	EnsemblPlants:TraesCS5A01G193900.1	TIGR:cd08301	:	:	:

Description

No Description!

Coordinates

chr5A:+:397249747..397251733

Molecular Weight (calculated)

39705.3 Da

IEP (calculated)

5.932

GRAVY (calculated)

0.092

Length

368 amino acids

Sequence
(BLAST)

001: MATAGKVIKC KAAVAWEAGK PLSMEEVEVA PPQAMEVRVK ILYTALCHTD VYFWEAKGQT PVFPRILGHE AGGIVESVGE GVTELVPGDH VLPVFTGECK
101: ECAHCRSEES NLCDLLRINV DRGVMIGDGQ SRFTIDGKPI FHFVGTSTFS EYTVIHVGCL AKIDPEAPLD KVCLLSCGIS TGLGATLNVA KPKKGMTVAI
201: FGLGAVGLAA MEGARMSGAS RIIGVDLNPA KHEQAKKFGC TDFVNPKDHT KPVQEVIVEM TDGGVDRAVE CTGNADAMIS AFECVHDGWG VAVLVGVAHK
301: EAVFKTHPMN FLNERTLRGL PGVVDMYMRK ELELDKFITH SVPFSQINTA FDLMLKGEGL RCVIRMEE

Best Arabidopsis Sequence Match ( AT1G64710.1 )
(BLAST)

001: METQGKVITC KAAVAWGAGE PLVMEDVKVD PPQRLEVRIR ILFTSICHTD LSAWKGENEA QRAYPRILGH EAAGIVESVG EGVEEMMAGD HVLPIFTGEC
101: GDCRVCKRDG ANLCERFRVD PMKKVMVTDG KTRFFTSKDN KPIYHFLNTS TFSEYTVIDS ACVLKVDPLF PLEKISLLSC GVSTGVGAAW NVADIQPAST
201: VAIFGLGAVG LAVAEGARAR GASKIIGIDI NPDKFQLGRE AGISEFINPK ESDKAVHERV MEITEGGVEY SFECAGSIEA LREAFLSTNS GVGVTVMLGV
301: HASPQLLPIH PMELFQGRSI TASVFGGFKP KTQLPFFITQ CLQGLLNLDL FISHQLPFHD INEAMQLLHQ GKALRCLLHL

Arabidopsis Description

Alcohol dehydrogenase-like 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZ49]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.