Factsheet for TraesCS6A01G386600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
extracellular 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, extracellular, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	extracellular
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G371200.1	Wheat	golgi	99.21	99.21
TraesCS6B01G425700.1	Wheat	cytosol	98.69	98.69
EES06008	Sorghum	cytosol	93.18	93.18
Os02t0815500-01	Rice	plasma membrane, plastid	92.13	92.13
VIT_07s0005g04600.t01	Wine grape	cytosol	56.43	91.1
GSMUA_Achr1P05790_001	Banana	cytosol, plasma membrane	90.03	90.5
CDX94738	Canola	cytosol	88.98	89.45
CDY22323	Canola	cytosol	88.98	89.45
Bra033706.1-P	Field mustard	cytosol	88.98	89.45
CDY13136	Canola	cytosol	88.19	88.65
CDY36960	Canola	cytosol	87.93	88.39
PGSC0003DMT400019942	Potato	cytosol	87.14	87.6
KRG95774	Soybean	cytosol, nucleus	86.35	86.81
VIT_07s0005g04610.t01	Wine grape	cytosol	27.56	86.78
KRH67486	Soybean	nucleus	86.09	86.54
AT5G43940.2	Thale cress	cytosol	88.45	86.19
KRH32257	Soybean	cytosol	85.83	86.05
Solyc09g064370.2.1	Tomato	nucleus	83.46	83.25
Bra027516.1-P	Field mustard	extracellular	87.66	82.27
KRH19643	Soybean	cytosol	23.62	78.26
HORVU6Hr1G090260.1	Barley	cytosol	98.69	74.9
TraesCS4A01G202100.2	Wheat	cytosol	59.84	60.16
Zm00001d018468_P001	Maize	plastid	81.36	59.5
TraesCS4A01G202200.1	Wheat	cytosol	58.27	58.58
TraesCS4A01G202300.1	Wheat	cytosol	57.74	58.05
TraesCS5A01G193900.1	Wheat	cytosol	55.64	57.61
TraesCS1A01G370200.1	Wheat	cytosol	56.69	57.14
TraesCS1A01G370100.1	Wheat	cytosol	56.69	56.84
TraesCS1A01G050100.2	Wheat	cytosol	53.28	51.52
TraesCS6A01G234500.2	Wheat	cytosol	49.87	49.48
TraesCS4A01G406200.1	Wheat	golgi	45.93	45.1
TraesCS2A01G163900.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	47.77	42.03
TraesCS4A01G406100.2	Wheat	cytosol	41.47	39.9
TraesCS7A01G322200.1	Wheat	mitochondrion	29.13	26.75
TraesCS7A01G269300.1	Wheat	cytosol	22.83	23.84

Protein Annotations

KEGG:00010+1.1.1.1	KEGG:00071+1.1.1.1	KEGG:00260+1.1.1.1	KEGG:00350+1.1.1.1	KEGG:00592+1.1.1.1	KEGG:00625+1.1.1.1
KEGG:00626+1.1.1.1	KEGG:00680+1.1.1.284	KEGG:00830+1.1.1.1	KEGG:00980+1.1.1.1	KEGG:00982+1.1.1.1	MapMan:18.7.1
Gene3D:3.40.50.720	Gene3D:3.90.180.10	InterPro:ADH_3	InterPro:ADH_C	InterPro:ADH_N	InterPro:ADH_Zn_CS
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0006069	GO:GO:0006091	GO:GO:0008150
GO:GO:0008152	GO:GO:0008270	GO:GO:0009987	GO:GO:0016491	GO:GO:0051903	GO:GO:0055114
InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF08240	ScanProsite:PS00059	PANTHER:PTHR43880
SUPFAM:SSF50129	SUPFAM:SSF51735	TIGRFAMs:TIGR02818	EnsemblPlantsGene:TraesCS6A01G386600	EnsemblPlants:TraesCS6A01G386600.1	TIGR:cd08300
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr6A:+:603279470..603282749

Molecular Weight (calculated)

40613.9 Da

IEP (calculated)

6.990

GRAVY (calculated)

0.049

Length

381 amino acids

Sequence
(BLAST)

001: MASSTQGQVI TCKAAVAYEA NKPLVVEDVQ VAPPQAGEVR IKILSTALCH TDYYTWSGKD PEGLFPCILG HEAAGIVESV GEGVTDVQPG DHVIPCYQAE
101: CKNCKMCNSG KTNLCGKVRG ATGVGVMMSD RKSRFSVNGK PIYHFMGTST FSQYTVVHDV SVAKINPQAP LDKVCLLGCG VSTGLGAVWN TAKVEAGSVV
201: AVFGLGTVGL AVAEGAKSAG ASRIIGIDID AKKFDVAKNF GVTEFVNPKD HDKPIQQVLV DLTDGGVDYS FECIGNVSIM RAALECCHKG WGTSVVVGVA
301: ASGQEIATRP FQLVTGRVWK GTAFGGFKSR SQVPWLVEKY MNKEIKVDEY ITHNMNLTDI NKAFDLLHEG GCLRCVLAME H

Best Arabidopsis Sequence Match ( AT5G43940.1 )
(BLAST)

001: MATQGQVITC KAAVAYEPNK PLVIEDVQVA PPQAGEVRIK ILYTALCHTD AYTWSGKDPE GLFPCILGHE AAGIVESVGE GVTEVQAGDH VIPCYQAECR
101: ECKFCKSGKT NLCGKVRSAT GVGIMMNDRK SRFSVNGKPI YHFMGTSTFS QYTVVHDVSV AKIDPTAPLD KVCLLGCGVP TGLGAVWNTA KVEPGSNVAI
201: FGLGTVGLAV AEGAKTAGAS RIIGIDIDSK KYETAKKFGV NEFVNPKDHD KPIQEVIVDL TDGGVDYSFE CIGNVSVMRA ALECCHKGWG TSVIVGVAAS
301: GQEISTRPFQ LVTGRVWKGT AFGGFKSRTQ VPWLVEKYMN KEIKVDEYIT HNLTLGEINK AFDLLHEGTC LRCVLDTSK

Arabidopsis Description

HOT5S-(hydroxymethyl)glutathione dehydrogenase [Source:UniProtKB/TrEMBL;Acc:F4K7D6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.